RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 UBXN6Q9BZV1 441 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 ARHGEF4Q9NR80 690 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 SPHK2Q9NRA0 654 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.08■□□□□ 0.16
CHD3-205ENST00000449744 HESX1Q9UBX0 185 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 DNMT3LQ9UJW3 386 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 NUDT5Q9UKK9 219 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 GNA14O95837 355 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 BMP6P22004 513 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 GRIA2P42262 883 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 STX17P56962 302 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 MRPS21P82921 87 aaKnown RBP16.07■□□□□ 0.16
CHD3-205ENST00000449744 LMNB2Q03252 620 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 KDSRQ06136 332 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 SPEM2Q0P670 501 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 PAK1Q13153 545 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 GOLGA7BQ2TAP0 167 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 KLHDC10Q6PID8 442 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 FOXR2Q6PJQ5 311 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 NUDT18Q6ZVK8 323 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 HTR3DQ70Z44 454 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 PIGZQ86VD9 579 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 C12orf40Q86WS4 652 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 ARHGAP18Q8N392 663 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 NAT16Q8N8M0 369 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 TSTD1Q8NFU3 115 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 WBP2Q969T9 261 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 RMDN1Q96DB5 314 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 CLIC5Q9NZA1 410 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 CHMP5Q9NZZ3 219 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 TSPAN16Q9UKR8 245 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 USP3Q9Y6I4 520 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 GPR179Q6PRD1 2367 aa16.07■□□□□ 0.16
CHD3-205ENST00000449744 TBC1D3BA6NDS4 549 aa16.06■□□□□ 0.16
CHD3-205ENST00000449744 MDM4O15151 490 aa16.06■□□□□ 0.16
CHD3-205ENST00000449744 HOXC11O43248 304 aaPredicted RBP16.06■□□□□ 0.16
CHD3-205ENST00000449744 VDRP11473 427 aa16.06■□□□□ 0.16
CHD3-205ENST00000449744 DGKEP52429 567 aa16.06■□□□□ 0.16
CHD3-205ENST00000449744 BCAT1P54687 386 aa16.06■□□□□ 0.16
CHD3-205ENST00000449744 UBE2HP62256 183 aa16.06■□□□□ 0.16
CHD3-205ENST00000449744 PUM1Q14671 1186 aaKnown RBP eCLIP16.06■□□□□ 0.16
CHD3-205ENST00000449744 DGLUCYQ7Z3D6 616 aa16.06■□□□□ 0.16
CHD3-205ENST00000449744 CACNA2D4Q7Z3S7 1137 aa16.06■□□□□ 0.16
CHD3-205ENST00000449744 SCD5Q86SK9 330 aa16.06■□□□□ 0.16
CHD3-205ENST00000449744 TMEM25Q86YD3 366 aa16.06■□□□□ 0.16
CHD3-205ENST00000449744 MIB1Q86YT6 1006 aa16.06■□□□□ 0.16
CHD3-205ENST00000449744 CCDC33Q8N5R6 958 aa16.06■□□□□ 0.16
CHD3-205ENST00000449744 FAM160A2Q8N612 972 aaPredicted RBP16.06■□□□□ 0.16
CHD3-205ENST00000449744 TRIML1Q8N9V2 468 aa16.06■□□□□ 0.16
CHD3-205ENST00000449744 LRRC4Q9HBW1 653 aa16.06■□□□□ 0.16
CHD3-205ENST00000449744 DEC1Q9P2X7 70 aa16.06■□□□□ 0.16
CHD3-205ENST00000449744 RASAL2Q9UJF2 1139 aa16.06■□□□□ 0.16
CHD3-205ENST00000449744 PRR5-ARHGAP8B1AHC4 643 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 PMM2O15305 246 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 P4HA2O15460 535 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 LRP3O75074 770 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 TULP3O75386 442 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 FGFR1OPO95684 399 aaKnown RBP16.05■□□□□ 0.16
CHD3-205ENST00000449744 SDHBP21912 280 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 TIE1P35590 1138 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 TNFRSF4P43489 277 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 TKTL1P51854 596 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 ARHGAP8P85298 464 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 PDE4CQ08493 712 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 BST2Q10589 180 aaKnown RBP16.05■□□□□ 0.16
CHD3-205ENST00000449744 RSPO4Q2I0M5 234 aaPredicted RBP16.05■□□□□ 0.16
CHD3-205ENST00000449744 HSF5Q4G112 596 aaPredicted RBP16.05■□□□□ 0.16
CHD3-205ENST00000449744 TMEM270Q6UE05 265 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 TPGS1Q6ZTW0 290 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 RSRC2Q7L4I2 434 aaKnown RBP16.05■□□□□ 0.16
CHD3-205ENST00000449744 TTC30AQ86WT1 665 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 PPM1KQ8N3J5 372 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 ZNF276Q8N554 614 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 XPO6Q96QU8 1125 aaKnown RBP16.05■□□□□ 0.16
CHD3-205ENST00000449744 BBS2Q9BXC9 721 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 PARD6AQ9NPB6 346 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 EBF1Q9UH73 591 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 KIAA1257Q9ULG3 409 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 STRIP2Q9ULQ0 834 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 MMP17Q9ULZ9 603 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 PCDHB4Q9Y5E5 795 aa16.05■□□□□ 0.16
CHD3-205ENST00000449744 A0A0A0MRY4 1105 aa16.04■□□□□ 0.16
CHD3-205ENST00000449744 NEDD8-MDP1E9PL57 170 aa16.04■□□□□ 0.16
CHD3-205ENST00000449744 XPO1O14980 1071 aaKnown RBP16.04■□□□□ 0.16
CHD3-205ENST00000449744 ALDH1A2O94788 518 aa16.04■□□□□ 0.16
CHD3-205ENST00000449744 KLF8O95600 359 aaPredicted RBP16.04■□□□□ 0.16
CHD3-205ENST00000449744 ZBED1O96006 694 aa16.04■□□□□ 0.16
CHD3-205ENST00000449744 YWHAGP61981 247 aaKnown RBP eCLIP16.04■□□□□ 0.16
CHD3-205ENST00000449744 COG7P83436 770 aa16.04■□□□□ 0.16
CHD3-205ENST00000449744 EFEMP1Q12805 493 aa16.04■□□□□ 0.16
CHD3-205ENST00000449744 CRY1Q16526 586 aa16.04■□□□□ 0.16
CHD3-205ENST00000449744 CAMK4Q16566 473 aa16.04■□□□□ 0.16
CHD3-205ENST00000449744 RAB41Q5JT25 222 aa16.04■□□□□ 0.16
CHD3-205ENST00000449744 EOGTQ5NDL2 527 aa16.04■□□□□ 0.16
CHD3-205ENST00000449744 ETFBKMTQ8IXQ9 262 aa16.04■□□□□ 0.16
CHD3-205ENST00000449744 ALLCQ8N6M5 410 aa16.04■□□□□ 0.16
CHD3-205ENST00000449744 TXNDC5Q8NBS9 432 aaKnown RBP16.04■□□□□ 0.16
CHD3-205ENST00000449744 IPO9Q96P70 1041 aaKnown RBP16.04■□□□□ 0.16
CHD3-205ENST00000449744 SRRTQ9BXP5 876 aaKnown RBP16.04■□□□□ 0.16
CHD3-205ENST00000449744 SEMA4GQ9NTN9 838 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms