RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 BCAP31P51572 246 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 CDK16Q00536 496 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 C1orf220Q5T0J3 134 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 ARHGEF16Q5VV41 709 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 ZNF746Q6NUN9 644 aaPredicted RBP13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 RBM15BQ8NDT2 890 aaKnown RBP13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 FBXL13Q8NEE6 735 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 FBXO27Q8NI29 283 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 TMC2Q8TDI7 906 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 SKA1Q96BD8 255 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 VPS37BQ9H9H4 285 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 HSPBP1Q9NZL4 362 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 TIMM22Q9Y584 194 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 IGSF9BQ9UPX0 1349 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 TCRBV7S2A1N4TA0A589 114 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 CCDC162PA2VCL2 907 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 PMLP29590 882 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 PSMC5P62195 406 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 KRT76Q01546 638 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 PDE1CQ14123 709 aaPredicted RBP13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 METTL21CQ5VZV1 264 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 EPS8L1Q8TE68 723 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 PYROXD1Q8WU10 500 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 C1orf54Q8WWF1 131 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 C9orf72Q96LT7 481 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 GCNAQ96QF7 691 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 NEURL2Q9BR09 285 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 ANKEF1Q9NU02 776 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 CLEC11AQ9Y240 323 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 MTO1Q9Y2Z2 717 aaKnown RBP13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 NR2E3Q9Y5X4 410 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 NFASCO94856 1347 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 GOLGA8TH3BQL2 631 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 CYP2C9P11712 490 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 RAB15P59190 212 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 TRIP10Q15642 601 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 KLHL38Q2WGJ6 581 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 EPC2Q52LR7 807 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 AAGABQ6PD74 315 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 TMEM120AQ9BXJ8 343 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 DCLK3Q9C098 648 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 ARMC7Q9H6L4 198 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 ADAMTS6Q9UKP5 1117 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 COG5Q9UP83 839 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 WDR64B1ANS9 1081 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 ENO1P06733 434 aaKnown RBP13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 MARCKSL1P49006 195 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 DMPKQ09013 629 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 SEPT6Q14141 434 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 ANKDD1AQ495B1 522 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 RHBDF2Q6PJF5 856 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 PAOXQ6QHF9 649 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 TMC7Q7Z402 723 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 SLC20A1Q8WUM9 679 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 STARD8Q92502 1023 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 LIN28AQ9H9Z2 209 aaKnown RBP13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 TBC1D23Q9NUY8 699 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 MYCLP12524 364 aaPredicted RBP13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 CCND2P30279 289 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 MAGEA4P43358 317 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 IGBP1P78318 339 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 GRAMD1BQ3KR37 738 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 POTEHQ6S545 545 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 NSMFQ6X4W1 530 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 TDRPQ86YL5 185 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 PEX5LQ8IYB4 626 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 SHC3Q92529 594 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 PRPF18Q99633 342 aaKnown RBP13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 OSBPL6Q9BZF3 934 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 TAS2R14Q9NYV8 317 aa13.96□□□□□ -0.17
SYNGAP1-204ENST00000449372 FCHO1O14526 889 aa13.96□□□□□ -0.18
SYNGAP1-204ENST00000449372 CYP26A1O43174 497 aa13.96□□□□□ -0.18
SYNGAP1-204ENST00000449372 KCNA4P22459 653 aa13.96□□□□□ -0.18
SYNGAP1-204ENST00000449372 RPL26P61254 145 aaKnown RBP13.96□□□□□ -0.18
SYNGAP1-204ENST00000449372 PDAP1Q13442 181 aaKnown RBP13.96□□□□□ -0.18
SYNGAP1-204ENST00000449372 TLR1Q15399 786 aa13.96□□□□□ -0.18
SYNGAP1-204ENST00000449372 PKN2Q16513 984 aaKnown RBP13.96□□□□□ -0.18
SYNGAP1-204ENST00000449372 BORAQ6PGQ7 559 aa13.96□□□□□ -0.18
SYNGAP1-204ENST00000449372 WDR75Q8IWA0 830 aaKnown RBP13.96□□□□□ -0.18
SYNGAP1-204ENST00000449372 SLC26A7Q8TE54 656 aa13.96□□□□□ -0.18
SYNGAP1-204ENST00000449372 DDI1Q8WTU0 396 aa13.96□□□□□ -0.18
SYNGAP1-204ENST00000449372 BTBD9Q96Q07 612 aa13.96□□□□□ -0.18
SYNGAP1-204ENST00000449372 TEX13BQ9BXU2 312 aa13.96□□□□□ -0.18
SYNGAP1-204ENST00000449372 FRMD8P1Q9BZ68 369 aaPredicted RBP13.96□□□□□ -0.18
SYNGAP1-204ENST00000449372 APPL1Q9UKG1 709 aa13.96□□□□□ -0.18
SYNGAP1-204ENST00000449372 CEPT1Q9Y6K0 416 aa13.96□□□□□ -0.18
SYNGAP1-204ENST00000449372 TISP43B9A030 160 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 POC1B-GALNT4F8VUJ3 575 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 CYP11B1P15538 503 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 DMP1Q13316 513 aaPredicted RBP13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 CYTH1Q15438 398 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 TRIP13Q15645 432 aaPredicted RBP13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 CYP4F22Q6NT55 531 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 IYDQ6PHW0 289 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 DLK2Q6UY11 383 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 RBM15Q96T37 977 aaKnown RBP eCLIP13.95□□□□□ -0.181e-6■■■■□ 22.8
SYNGAP1-204ENST00000449372 NTPCRQ9BSD7 190 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 ARHGEF4Q9NR80 690 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 TRNAU1APQ9NX07 287 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 PLK2Q9NYY3 685 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms