RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 PJA1Q8NG27 643 aa21.54■■□□□ 1.04
PTX4-203ENST00000447419 KCTD13Q8WZ19 329 aa21.54■■□□□ 1.04
PTX4-203ENST00000447419 FAM3CQ92520 227 aa21.54■■□□□ 1.04
PTX4-203ENST00000447419 SIT1Q9Y3P8 196 aa21.54■■□□□ 1.04
PTX4-203ENST00000447419 MYO16Q9Y6X6 1858 aa21.54■■□□□ 1.04
PTX4-203ENST00000447419 TICRRQ7Z2Z1 1910 aa21.53■■□□□ 1.04
PTX4-203ENST00000447419 SPECC1L-ADORA2AF8WAN1 911 aa21.53■■□□□ 1.04
PTX4-203ENST00000447419 RALAP11233 206 aa21.53■■□□□ 1.04
PTX4-203ENST00000447419 PFKLP17858 780 aa21.53■■□□□ 1.04
PTX4-203ENST00000447419 EML3Q32P44 896 aa21.53■■□□□ 1.04
PTX4-203ENST00000447419 ITPRIPL2Q3MIP1 535 aa21.53■■□□□ 1.04
PTX4-203ENST00000447419 PM20D1Q6GTS8 502 aa21.53■■□□□ 1.04
PTX4-203ENST00000447419 ZNF852Q6ZMS4 543 aa21.53■■□□□ 1.04
PTX4-203ENST00000447419 C1orf131Q8NDD1 294 aaKnown RBP21.53■■□□□ 1.04
PTX4-203ENST00000447419 NEK11Q8NG66 645 aa21.53■■□□□ 1.04
PTX4-203ENST00000447419 STK33Q9BYT3 514 aa21.53■■□□□ 1.04
PTX4-203ENST00000447419 LTB4R2Q9NPC1 389 aa21.53■■□□□ 1.04
PTX4-203ENST00000447419 SH3BP1Q9Y3L3 701 aa21.53■■□□□ 1.04
PTX4-203ENST00000447419 E5RJQ4 531 aa21.52■■□□□ 1.04
PTX4-203ENST00000447419 SERPINC1P01008 464 aa21.52■■□□□ 1.04
PTX4-203ENST00000447419 GLULP15104 373 aa21.52■■□□□ 1.04
PTX4-203ENST00000447419 CTHP32929 405 aa21.52■■□□□ 1.04
PTX4-203ENST00000447419 KRT9P35527 623 aa21.52■■□□□ 1.04
PTX4-203ENST00000447419 DAOAP59103 153 aa21.52■■□□□ 1.04
PTX4-203ENST00000447419 PON2Q15165 354 aa21.52■■□□□ 1.04
PTX4-203ENST00000447419 BSPRYQ5W0U4 402 aa21.52■■□□□ 1.04
PTX4-203ENST00000447419 BTBD8Q5XKL5 378 aa21.52■■□□□ 1.04
PTX4-203ENST00000447419 BBS7Q8IWZ6 715 aa21.52■■□□□ 1.04
PTX4-203ENST00000447419 WDTC1Q8N5D0 677 aa21.52■■□□□ 1.04
PTX4-203ENST00000447419 CHFRQ96EP1 664 aa21.52■■□□□ 1.04
PTX4-203ENST00000447419 DDX23Q9BUQ8 820 aaKnown RBP21.52■■□□□ 1.04
PTX4-203ENST00000447419 KLF16Q9BXK1 252 aaPredicted RBP21.52■■□□□ 1.04
PTX4-203ENST00000447419 TRPV5Q9NQA5 729 aa21.52■■□□□ 1.04
PTX4-203ENST00000447419 RTN4Q9NQC3 1192 aaKnown RBP21.52■■□□□ 1.04
PTX4-203ENST00000447419 DNMT3LQ9UJW3 386 aa21.52■■□□□ 1.04
PTX4-203ENST00000447419 CYP11B1P15538 503 aa21.51■■□□□ 1.03
PTX4-203ENST00000447419 CLCN5P51795 746 aa21.51■■□□□ 1.03
PTX4-203ENST00000447419 ARID5AQ03989 594 aa21.51■■□□□ 1.03
PTX4-203ENST00000447419 PDGFRLQ15198 375 aa21.51■■□□□ 1.03
PTX4-203ENST00000447419 NOP9Q86U38 636 aaKnown RBP21.51■■□□□ 1.03
PTX4-203ENST00000447419 CCDC105Q8IYK2 499 aa21.51■■□□□ 1.03
PTX4-203ENST00000447419 SLC20A1Q8WUM9 679 aa21.51■■□□□ 1.03
PTX4-203ENST00000447419 SPAG5Q96R06 1193 aa21.51■■□□□ 1.03
PTX4-203ENST00000447419 PDCL3Q9H2J4 239 aa21.51■■□□□ 1.03
PTX4-203ENST00000447419 ECT2Q9H8V3 914 aa21.51■■□□□ 1.03
PTX4-203ENST00000447419 CNGB3Q9NQW8 809 aa21.51■■□□□ 1.03
PTX4-203ENST00000447419 RBM12Q9NTZ6 932 aaKnown RBP21.51■■□□□ 1.03
PTX4-203ENST00000447419 SFMBT1Q9UHJ3 866 aa21.51■■□□□ 1.03
PTX4-203ENST00000447419 COL4A2P08572 1712 aa21.51■■□□□ 1.03
PTX4-203ENST00000447419 PSEN1P49768 467 aa21.5■■□□□ 1.03
PTX4-203ENST00000447419 PDCLQ13371 301 aa21.5■■□□□ 1.03
PTX4-203ENST00000447419 ARHGAP18Q8N392 663 aa21.5■■□□□ 1.03
PTX4-203ENST00000447419 PIWIL1Q96J94 861 aaKnown RBP21.5■■□□□ 1.03
PTX4-203ENST00000447419 HSFY1Q96LI6 401 aa21.5■■□□□ 1.03
PTX4-203ENST00000447419 ERGIC2Q96RQ1 377 aa21.5■■□□□ 1.03
PTX4-203ENST00000447419 CLIC5Q9NZA1 410 aa21.5■■□□□ 1.03
PTX4-203ENST00000447419 SLC12A8A0AV02 714 aa21.5■■□□□ 1.03
PTX4-203ENST00000447419 GOLGA6L19H0YKK7 550 aa21.5■■□□□ 1.03
PTX4-203ENST00000447419 CPA6Q8N4T0 437 aa21.5■■□□□ 1.03
PTX4-203ENST00000447419 RNF214Q8ND24 703 aa21.5■■□□□ 1.03
PTX4-203ENST00000447419 ATP2A3Q93084 1043 aa21.5■■□□□ 1.03
PTX4-203ENST00000447419 FAM149B1Q96BN6 582 aa21.5■■□□□ 1.03
PTX4-203ENST00000447419 CPXM1Q96SM3 734 aa21.5■■□□□ 1.03
PTX4-203ENST00000447419 MARCH2Q9P0N8 246 aa21.5■■□□□ 1.03
PTX4-203ENST00000447419 ZDBF2Q9HCK1 2354 aa21.49■■□□□ 1.03
PTX4-203ENST00000447419 PAPSS1O43252 624 aaPredicted RBP21.49■■□□□ 1.03
PTX4-203ENST00000447419 MSI1O43347 362 aaKnown RBP21.49■■□□□ 1.03
PTX4-203ENST00000447419 MMEP08473 750 aa21.49■■□□□ 1.03
PTX4-203ENST00000447419 TCF3P15923 654 aa21.49■■□□□ 1.03
PTX4-203ENST00000447419 GJA4P35212 333 aa21.49■■□□□ 1.03
PTX4-203ENST00000447419 SOX5P35711 763 aa21.49■■□□□ 1.03
PTX4-203ENST00000447419 JAM2P57087 298 aa21.49■■□□□ 1.03
PTX4-203ENST00000447419 TAF5Q15542 800 aa21.49■■□□□ 1.03
PTX4-203ENST00000447419 FILIP1LQ4L180 1135 aa21.49■■□□□ 1.03
PTX4-203ENST00000447419 DDX42Q86XP3 938 aaKnown RBP eCLIP21.49■■□□□ 1.03
PTX4-203ENST00000447419 RNF139Q8WU17 664 aa21.49■■□□□ 1.03
PTX4-203ENST00000447419 SLC4A5Q9BY07 1137 aa21.49■■□□□ 1.03
PTX4-203ENST00000447419 C8orf33Q9H7E9 229 aaPredicted RBP21.49■■□□□ 1.03
PTX4-203ENST00000447419 FBRSL1Q9HCM7 1045 aaKnown RBP21.49■■□□□ 1.03
PTX4-203ENST00000447419 HCN4Q9Y3Q4 1203 aa21.49■■□□□ 1.03
PTX4-203ENST00000447419 MAN2B1O00754 1011 aa21.48■■□□□ 1.03
PTX4-203ENST00000447419 CYP17A1P05093 508 aa21.48■■□□□ 1.03
PTX4-203ENST00000447419 TPM4P67936 248 aa21.48■■□□□ 1.03
PTX4-203ENST00000447419 FANCCQ00597 558 aa21.48■■□□□ 1.03
PTX4-203ENST00000447419 C2CD6Q53TS8 623 aa21.48■■□□□ 1.03
PTX4-203ENST00000447419 RALGPS2Q86X27 583 aaPredicted RBP21.48■■□□□ 1.03
PTX4-203ENST00000447419 ADGRG2Q8IZP9 1017 aa21.48■■□□□ 1.03
PTX4-203ENST00000447419 EPS8L1Q8TE68 723 aa21.48■■□□□ 1.03
PTX4-203ENST00000447419 DDX1Q92499 740 aaKnown RBP21.48■■□□□ 1.03
PTX4-203ENST00000447419 BHMTQ93088 406 aa21.48■■□□□ 1.03
PTX4-203ENST00000447419 PPP1R13BQ96KQ4 1090 aa21.48■■□□□ 1.03
PTX4-203ENST00000447419 TSPY26PQ9H489 355 aa21.48■■□□□ 1.03
PTX4-203ENST00000447419 PCDHGC3Q9UN70 934 aa21.48■■□□□ 1.03
PTX4-203ENST00000447419 E2F8A0AVK6 867 aa21.47■■□□□ 1.03
PTX4-203ENST00000447419 GREM1O60565 184 aa21.47■■□□□ 1.03
PTX4-203ENST00000447419 GRAP2O75791 330 aa21.47■■□□□ 1.03
PTX4-203ENST00000447419 STC2O76061 302 aa21.47■■□□□ 1.03
PTX4-203ENST00000447419 NFATC1O95644 943 aa21.47■■□□□ 1.03
PTX4-203ENST00000447419 LTFP02788 710 aa21.47■■□□□ 1.03
PTX4-203ENST00000447419 ERBB2P04626 1255 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms