RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 PLCB2Q00722 1185 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 ARID5AQ03989 594 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 EFEMP1Q12805 493 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 PDCLQ13371 301 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 UBXN2BQ14CS0 331 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 BTBD8Q5XKL5 378 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 BHLHA9Q7RTU4 235 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 CACNA2D4Q7Z3S7 1137 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 NOP9Q86U38 636 aaKnown RBP12.51□□□□□ -0.41
RFC4-208ENST00000447345 ARHGAP18Q8N392 663 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 EDEM1Q92611 657 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 WBP2Q969T9 261 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 ZFRQ96KR1 1074 aaKnown RBP12.51□□□□□ -0.41
RFC4-208ENST00000447345 HPS4Q9NQG7 708 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 CNGB3Q9NQW8 809 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 DUS2Q9NX74 493 aaKnown RBP12.51□□□□□ -0.41
RFC4-208ENST00000447345 TJP2Q9UDY2 1190 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 SH3BP1Q9Y3L3 701 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 E5RJQ4 531 aa12.5□□□□□ -0.41
RFC4-208ENST00000447345 HMBSP08397 361 aa12.5□□□□□ -0.41
RFC4-208ENST00000447345 KCNA4P22459 653 aa12.5□□□□□ -0.41
RFC4-208ENST00000447345 SOX5P35711 763 aa12.5□□□□□ -0.41
RFC4-208ENST00000447345 JAM2P57087 298 aa12.5□□□□□ -0.41
RFC4-208ENST00000447345 BPIFB4P59827 614 aa12.5□□□□□ -0.41
RFC4-208ENST00000447345 PM20D1Q6GTS8 502 aa12.5□□□□□ -0.41
RFC4-208ENST00000447345 DDX42Q86XP3 938 aaKnown RBP eCLIP12.5□□□□□ -0.41
RFC4-208ENST00000447345 EPS8L1Q8TE68 723 aa12.5□□□□□ -0.41
RFC4-208ENST00000447345 SLC20A1Q8WUM9 679 aa12.5□□□□□ -0.41
RFC4-208ENST00000447345 OSCP1Q8WVF1 389 aa12.5□□□□□ -0.41
RFC4-208ENST00000447345 FAM149B1Q96BN6 582 aa12.5□□□□□ -0.41
RFC4-208ENST00000447345 HSFY1Q96LI6 401 aa12.5□□□□□ -0.41
RFC4-208ENST00000447345 FAM83CQ9BQN1 747 aa12.5□□□□□ -0.41
RFC4-208ENST00000447345 CLIC5Q9NZA1 410 aa12.5□□□□□ -0.41
RFC4-208ENST00000447345 DNMT3LQ9UJW3 386 aa12.5□□□□□ -0.41
RFC4-208ENST00000447345 NDRG2Q9UN36 371 aaKnown RBP12.5□□□□□ -0.41
RFC4-208ENST00000447345 PCDHGC3Q9UN70 934 aa12.5□□□□□ -0.41
RFC4-208ENST00000447345 CEP83Q9Y592 693 aa12.5□□□□□ -0.41
RFC4-208ENST00000447345 OTOL1A6NHN0 477 aaPredicted RBP12.49□□□□□ -0.41
RFC4-208ENST00000447345 SPECC1L-ADORA2AF8WAN1 911 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 MMEP08473 750 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 TCF3P15923 654 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 STAT1P42224 750 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 PRKCQQ04759 706 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 GOLGA8FQ08AF8 430 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 GOLGA8DPQ0D2H9 430 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 RUNX3Q13761 415 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 PDGFRLQ15198 375 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 MEA1Q16626 185 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 EML3Q32P44 896 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 ITPRIPL2Q3MIP1 535 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 BSPRYQ5W0U4 402 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 BMP8AQ7Z5Y6 402 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 TADA2BQ86TJ2 420 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 SCUBE3Q8IX30 993 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 CPA6Q8N4T0 437 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 WDTC1Q8N5D0 677 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 TMEM105Q8N8V8 129 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 RNF139Q8WU17 664 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 GOLGA1Q92805 767 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 SHDQ96IW2 340 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 CPXM1Q96SM3 734 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 CDK5RAP1Q96SZ6 601 aaKnown RBP12.49□□□□□ -0.41
RFC4-208ENST00000447345 KLF16Q9BXK1 252 aaPredicted RBP12.49□□□□□ -0.41
RFC4-208ENST00000447345 LINC00597Q9H2U6 94 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 SYNCQ9H7C4 482 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 IFNKQ9P0W0 207 aa12.49□□□□□ -0.41
RFC4-208ENST00000447345 KANSL1LA0AUZ9 987 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 SLC12A8A0AV02 714 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 PAPSS1O43252 624 aaPredicted RBP12.48□□□□□ -0.41
RFC4-208ENST00000447345 MSI1O43347 362 aaKnown RBP12.48□□□□□ -0.41
RFC4-208ENST00000447345 PI15O43692 258 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 FBXO21O94952 628 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 LTFP02788 710 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 ERBB2P04626 1255 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 DCNP07585 359 aaKnown RBP12.48□□□□□ -0.41
RFC4-208ENST00000447345 AOC1P19801 751 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 TARSP26639 723 aaKnown RBP12.48□□□□□ -0.41
RFC4-208ENST00000447345 CTHP32929 405 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 ACADSBP45954 432 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 UBASH3AP57075 661 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 STARD6P59095 220 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 PTPN20Q4JDL3 420 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 ASTLQ6HA08 431 aaPredicted RBP12.48□□□□□ -0.41
RFC4-208ENST00000447345 TXNDC11Q6PKC3 985 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 ZNF852Q6ZMS4 543 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 FAM183BPQ6ZVS7 135 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 BBS7Q8IWZ6 715 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 PJA1Q8NG27 643 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 IPO4Q8TEX9 1081 aaKnown RBP12.48□□□□□ -0.41
RFC4-208ENST00000447345 IRGQQ8WZA9 623 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 DDX1Q92499 740 aaKnown RBP12.48□□□□□ -0.41
RFC4-208ENST00000447345 FAM3CQ92520 227 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 ATP2A3Q93084 1043 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 PIWIL1Q96J94 861 aaKnown RBP12.48□□□□□ -0.41
RFC4-208ENST00000447345 PPP1R13BQ96KQ4 1090 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 NOX5Q96PH1 765 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 SLC4A5Q9BY07 1137 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 ECT2Q9H8V3 914 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 LTB4R2Q9NPC1 389 aa12.48□□□□□ -0.41
RFC4-208ENST00000447345 TRPV5Q9NQA5 729 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms