RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 ANKRD42Q8N9B4 389 aa13.62□□□□□ -0.23
DDX56-206ENST00000446987 APBB2Q92870 758 aa13.62□□□□□ -0.23
DDX56-206ENST00000446987 ABTB1Q969K4 478 aaPredicted RBP13.62□□□□□ -0.23
DDX56-206ENST00000446987 PTCD3Q96EY7 689 aaKnown RBP13.62□□□□□ -0.23
DDX56-206ENST00000446987 ZFRQ96KR1 1074 aaKnown RBP13.62□□□□□ -0.23
DDX56-206ENST00000446987 PRICKLE1Q96MT3 831 aaPredicted RBP13.62□□□□□ -0.23
DDX56-206ENST00000446987 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.62□□□□□ -0.23
DDX56-206ENST00000446987 KIFC3Q9BVG8 833 aa13.62□□□□□ -0.23
DDX56-206ENST00000446987 KIAA1522Q9P206 1035 aaPredicted RBP13.62□□□□□ -0.23
DDX56-206ENST00000446987 DMTF1Q9Y222 760 aa13.62□□□□□ -0.23
DDX56-206ENST00000446987 SNX24Q9Y343 169 aa13.62□□□□□ -0.23
DDX56-206ENST00000446987 ABHD14A-ACY1A0A1B0GW23 586 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 SRGAP2CP0DJJ0 459 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 FOXN2P32314 431 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 NEK2P51955 445 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 MBTD1Q05BQ5 628 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 POU5F1BQ06416 359 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 MYBPC2Q14324 1141 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 MXD4Q14582 209 aaPredicted RBP13.61□□□□□ -0.23
DDX56-206ENST00000446987 CCDC153Q494R4 210 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 AAGABQ6PD74 315 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 NET1Q7Z628 596 aaPredicted RBP13.61□□□□□ -0.23
DDX56-206ENST00000446987 CLNKQ7Z7G1 428 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 GPBP1Q86WP2 473 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 PLEKHO2Q8TD55 490 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 TSG101Q99816 390 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 DDX50Q9BQ39 737 aaKnown RBP13.61□□□□□ -0.23
DDX56-206ENST00000446987 REEP2Q9BRK0 252 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 NFKBIZQ9BYH8 718 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 TRIM31Q9BZY9 425 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 NAGPAQ9UK23 515 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 KIAA1671Q9BY89 1806 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 NCANO14594 1321 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 FNDC1Q4ZHG4 1894 aaPredicted RBP13.61□□□□□ -0.23
DDX56-206ENST00000446987 FAM47DPA6NHR8 397 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 MYMKA6NI61 221 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 VILLO15195 856 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 DDX3YO15523 660 aaKnown RBP13.61□□□□□ -0.23
DDX56-206ENST00000446987 PRPF4O43172 522 aaKnown RBP eCLIP13.61□□□□□ -0.23
DDX56-206ENST00000446987 FKBP6O75344 327 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 SERPINB7O75635 380 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 CBX6O95503 412 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 S100A1P23297 94 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 SLCO1A2P46721 670 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 NEK3P51956 506 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 AP2B1P63010 937 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 CDC16Q13042 620 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 MED21Q13503 144 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 MPP2Q14168 576 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 INAQ16352 499 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 PDK4Q16654 411 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 TRMT5Q32P41 509 aaKnown RBP13.61□□□□□ -0.23
DDX56-206ENST00000446987 MAP7D1Q3KQU3 841 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 TAF1BQ53T94 588 aaPredicted RBP13.61□□□□□ -0.23
DDX56-206ENST00000446987 TMCO4Q5TGY1 634 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 ZNF449Q6P9G9 518 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 DHRS4L2Q6PKH6 230 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 SFR1Q86XK3 245 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 SCAIQ8N9R8 606 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 GDAP1Q8TB36 358 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 NSL1Q96IY1 281 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 CEP63Q96MT8 703 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 FIZ1Q96SL8 496 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 GCOM2Q9BZD3 368 aaPredicted RBP13.61□□□□□ -0.23
DDX56-206ENST00000446987 HESX1Q9UBX0 185 aa13.61□□□□□ -0.23
DDX56-206ENST00000446987 SH3PXD2BA1X283 911 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 TTLL13PA6NNM8 815 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 ZBBXA8MT70 800 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 GYG2O15488 501 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 EXOC3O60645 756 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 RNASEH1O60930 286 aaKnown RBP13.6□□□□□ -0.23
DDX56-206ENST00000446987 CDH16O75309 829 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 PDE5AO76074 875 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 H2AFZP0C0S5 128 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 ACTN1P12814 892 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 ANPEPP15144 967 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 CTNNA2P26232 953 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 RPL21P46778 160 aaKnown RBP13.6□□□□□ -0.23
DDX56-206ENST00000446987 CDC42EP1Q00587 391 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 NFX1Q12986 1120 aaKnown RBP13.6□□□□□ -0.23
DDX56-206ENST00000446987 IKBKEQ14164 716 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 CYP1B1Q16678 543 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 KYNUQ16719 465 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 H2AFVQ71UI9 128 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 TAS1R3Q7RTX0 852 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 VPS36Q86VN1 386 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 KIAA0895Q8NCT3 520 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 MCUR1Q96AQ8 359 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 DNAJC19Q96DA6 116 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 NACA2Q9H009 215 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 GANQ9H2C0 597 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 USP29Q9HBJ7 922 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 PFDN4Q9NQP4 134 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 NDE1Q9NXR1 346 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 KCND2Q9NZV8 630 aa13.6□□□□□ -0.23
DDX56-206ENST00000446987 SCHIP1Q9P0W5 487 aaPredicted RBP13.6□□□□□ -0.23
DDX56-206ENST00000446987 hCG_2014768A0A024R1R8 64 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 SFI1A8K8P3 1242 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 ENPP3O14638 875 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 ARHGEF15O94989 841 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms