RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 POLR3BQ9NW08 1133 aaPredicted RBP21.13■□□□□ 0.97
LRCH3-208ENST00000443727 KIAA1468Q9P260 1216 aa21.13■□□□□ 0.97
LRCH3-208ENST00000443727 NUDT5Q9UKK9 219 aa21.13■□□□□ 0.97
LRCH3-208ENST00000443727 EIF2DP41214 584 aaKnown RBP21.12■□□□□ 0.97
LRCH3-208ENST00000443727 PLA2G4AP47712 749 aa21.12■□□□□ 0.97
LRCH3-208ENST00000443727 KDSRQ06136 332 aa21.12■□□□□ 0.97
LRCH3-208ENST00000443727 DMC1Q14565 340 aa21.12■□□□□ 0.97
LRCH3-208ENST00000443727 KLHDC10Q6PID8 442 aa21.12■□□□□ 0.97
LRCH3-208ENST00000443727 TMEM270Q6UE05 265 aa21.12■□□□□ 0.97
LRCH3-208ENST00000443727 HTR3DQ70Z44 454 aa21.12■□□□□ 0.97
LRCH3-208ENST00000443727 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.12■□□□□ 0.97
LRCH3-208ENST00000443727 MIB1Q86YT6 1006 aa21.12■□□□□ 0.97
LRCH3-208ENST00000443727 GPR161Q8N6U8 529 aaKnown RBP21.12■□□□□ 0.97
LRCH3-208ENST00000443727 WBP2Q969T9 261 aa21.12■□□□□ 0.97
LRCH3-208ENST00000443727 ARHGEF4Q9NR80 690 aa21.12■□□□□ 0.97
LRCH3-208ENST00000443727 TSPAN16Q9UKR8 245 aa21.12■□□□□ 0.97
LRCH3-208ENST00000443727 KIAA1257Q9ULG3 409 aa21.12■□□□□ 0.97
LRCH3-208ENST00000443727 PCDHB4Q9Y5E5 795 aa21.12■□□□□ 0.97
LRCH3-208ENST00000443727 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.12■□□□□ 0.97
LRCH3-208ENST00000443727 USP3Q9Y6I4 520 aa21.12■□□□□ 0.97
LRCH3-208ENST00000443727 SPTBN4Q9H254 2564 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 K7EQS6 105 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 MDM4O15151 490 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 PMM2O15305 246 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 P4HA2O15460 535 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 KAT7O95251 611 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 CCDC192P0DO97 292 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 TKTL1P51854 596 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 BCAT1P54687 386 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 KCNH2Q12809 1159 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 RSRC2Q7L4I2 434 aaKnown RBP21.11■□□□□ 0.97
LRCH3-208ENST00000443727 SCD5Q86SK9 330 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 C12orf40Q86WS4 652 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 TTC30AQ86WT1 665 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 CREBRFQ8IUR6 639 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 NAT16Q8N8M0 369 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 USP33Q8TEY7 942 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 LRRC4Q9HBW1 653 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 SPHK2Q9NRA0 654 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 CLIC5Q9NZA1 410 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 USP18Q9UMW8 372 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 ATG2BQ96BY7 2078 aa21.11■□□□□ 0.97
LRCH3-208ENST00000443727 FRYLO94915 3013 aa21.1■□□□□ 0.97
LRCH3-208ENST00000443727 MYO16Q9Y6X6 1858 aa21.1■□□□□ 0.97
LRCH3-208ENST00000443727 CCDC163A0A0D9SF12 145 aa21.1■□□□□ 0.97
LRCH3-208ENST00000443727 RPP40O75818 363 aaKnown RBP21.1■□□□□ 0.97
LRCH3-208ENST00000443727 APBB3O95704 486 aa21.1■□□□□ 0.97
LRCH3-208ENST00000443727 AFPP02771 609 aaKnown RBP21.1■□□□□ 0.97
LRCH3-208ENST00000443727 VDRP11473 427 aa21.1■□□□□ 0.97
LRCH3-208ENST00000443727 GRIA2P42262 883 aa21.1■□□□□ 0.97
LRCH3-208ENST00000443727 ID4P47928 161 aa21.1■□□□□ 0.97
LRCH3-208ENST00000443727 PDE4CQ08493 712 aa21.1■□□□□ 0.97
LRCH3-208ENST00000443727 BST2Q10589 180 aaKnown RBP21.1■□□□□ 0.97
LRCH3-208ENST00000443727 PREPLQ4J6C6 727 aaPredicted RBP21.1■□□□□ 0.97
LRCH3-208ENST00000443727 TMEM25Q86YD3 366 aa21.1■□□□□ 0.97
LRCH3-208ENST00000443727 TRIM59Q8IWR1 403 aa21.1■□□□□ 0.97
LRCH3-208ENST00000443727 CCDC33Q8N5R6 958 aa21.1■□□□□ 0.97
LRCH3-208ENST00000443727 TSTD1Q8NFU3 115 aa21.1■□□□□ 0.97
LRCH3-208ENST00000443727 UBA3Q8TBC4 463 aa21.1■□□□□ 0.97
LRCH3-208ENST00000443727 IPO9Q96P70 1041 aaKnown RBP21.1■□□□□ 0.97
LRCH3-208ENST00000443727 DEC1Q9P2X7 70 aa21.1■□□□□ 0.97
LRCH3-208ENST00000443727 RASAL2Q9UJF2 1139 aa21.1■□□□□ 0.97
LRCH3-208ENST00000443727 TBC1D3BA6NDS4 549 aa21.09■□□□□ 0.97
LRCH3-208ENST00000443727 XPO1O14980 1071 aaKnown RBP21.09■□□□□ 0.97
LRCH3-208ENST00000443727 AXIN1O15169 862 aa21.09■□□□□ 0.97
LRCH3-208ENST00000443727 HOXC11O43248 304 aaPredicted RBP21.09■□□□□ 0.97
LRCH3-208ENST00000443727 ZBED1O96006 694 aa21.09■□□□□ 0.97
LRCH3-208ENST00000443727 RETP07949 1114 aa21.09■□□□□ 0.97
LRCH3-208ENST00000443727 MRPS21P82921 87 aaKnown RBP21.09■□□□□ 0.97
LRCH3-208ENST00000443727 EFEMP1Q12805 493 aa21.09■□□□□ 0.97
LRCH3-208ENST00000443727 NUDT18Q6ZVK8 323 aa21.09■□□□□ 0.97
LRCH3-208ENST00000443727 RRAGAQ7L523 313 aa21.09■□□□□ 0.97
LRCH3-208ENST00000443727 SIX6OS1Q8N1H7 587 aa21.09■□□□□ 0.97
LRCH3-208ENST00000443727 UBR7Q8N806 425 aa21.09■□□□□ 0.97
LRCH3-208ENST00000443727 EHBP1Q8NDI1 1231 aa21.09■□□□□ 0.97
LRCH3-208ENST00000443727 GAB3Q8WWW8 586 aa21.09■□□□□ 0.97
LRCH3-208ENST00000443727 RWDD2AQ9UIY3 292 aa21.09■□□□□ 0.97
LRCH3-208ENST00000443727 STRIP2Q9ULQ0 834 aa21.09■□□□□ 0.97
LRCH3-208ENST00000443727 O00370 1275 aa21.08■□□□□ 0.97
LRCH3-208ENST00000443727 PAEPP09466 180 aa21.08■□□□□ 0.97
LRCH3-208ENST00000443727 TIE1P35590 1138 aa21.08■□□□□ 0.97
LRCH3-208ENST00000443727 YWHAGP61981 247 aaKnown RBP eCLIP21.08■□□□□ 0.97
LRCH3-208ENST00000443727 COG7P83436 770 aa21.08■□□□□ 0.97
LRCH3-208ENST00000443727 RAB41Q5JT25 222 aa21.08■□□□□ 0.97
LRCH3-208ENST00000443727 TPGS1Q6ZTW0 290 aa21.08■□□□□ 0.97
LRCH3-208ENST00000443727 ZNF276Q8N554 614 aa21.08■□□□□ 0.97
LRCH3-208ENST00000443727 KAT5Q92993 513 aa21.08■□□□□ 0.97
LRCH3-208ENST00000443727 BBS2Q9BXC9 721 aa21.08■□□□□ 0.97
LRCH3-208ENST00000443727 ULBP1Q9BZM6 244 aa21.08■□□□□ 0.97
LRCH3-208ENST00000443727 WDR35Q9P2L0 1181 aa21.08■□□□□ 0.97
LRCH3-208ENST00000443727 NEDD8-MDP1E9PL57 170 aa21.07■□□□□ 0.96
LRCH3-208ENST00000443727 TULP2O00295 520 aa21.07■□□□□ 0.96
LRCH3-208ENST00000443727 GREM1O60565 184 aa21.07■□□□□ 0.96
LRCH3-208ENST00000443727 TULP3O75386 442 aa21.07■□□□□ 0.96
LRCH3-208ENST00000443727 HMBSP08397 361 aa21.07■□□□□ 0.96
LRCH3-208ENST00000443727 SETSIPP0DME0 302 aa21.07■□□□□ 0.96
LRCH3-208ENST00000443727 TNFRSF4P43489 277 aa21.07■□□□□ 0.96
LRCH3-208ENST00000443727 DGKEP52429 567 aa21.07■□□□□ 0.96
LRCH3-208ENST00000443727 MARSP56192 900 aaKnown RBP21.07■□□□□ 0.96
LRCH3-208ENST00000443727 SPEM2Q0P670 501 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms