RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 GAD2Q05329 585 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 LMAN2Q12907 356 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 BIRC3Q13489 604 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 CUL4BQ13620 913 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 NCOA4Q13772 614 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 KNOP1Q1ED39 458 aaKnown RBP8.83□□□□□ -1
TOP3B-209ENST00000442653 ANO4Q32M45 955 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 ZNF699Q32M78 642 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 C10orf76Q5T2E6 689 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 PEAR1Q5VY43 1037 aaPredicted RBP8.83□□□□□ -1
TOP3B-209ENST00000442653 LYSMD4Q5XG99 296 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 EGFLAMQ63HQ2 1017 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 KIAA1211LQ6NV74 962 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 GPRIN1Q7Z2K8 1008 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 GRAMD1CQ8IYS0 662 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 PGBD3Q8N328 593 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 ZNF513Q8N8E2 541 aaPredicted RBP8.83□□□□□ -1
TOP3B-209ENST00000442653 TERB1Q8NA31 727 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 KDF1Q8NAX2 398 aaPredicted RBP8.83□□□□□ -1
TOP3B-209ENST00000442653 SLC2A14Q8TDB8 520 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 PARD3BQ8TEW8 1205 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 GATA6Q92908 595 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 OTUB2Q96DC9 234 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 ERLEC1Q96DZ1 483 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 P2RY11Q96G91 374 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 SMARCD1Q96GM5 515 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 SMOQ99835 787 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 DUSP9Q99956 384 aaKnown RBP8.83□□□□□ -1
TOP3B-209ENST00000442653 MED10Q9BTT4 135 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 SCNM1Q9BWG6 230 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 CD248Q9HCU0 757 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 SPHK2Q9NRA0 654 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 CALCOCO1Q9P1Z2 691 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 DEC1Q9P2X7 70 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 SH3BP1Q9Y3L3 701 aa8.83□□□□□ -1
TOP3B-209ENST00000442653 PCDH15Q96QU1 1955 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 ATP8B3O60423 1300 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 ADAMTS9Q9P2N4 1935 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 SPAARA0A1B0GVQ0 90 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 CYP26A1O43174 497 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 ATMINO43313 823 aaPredicted RBP8.82□□□□□ -1
TOP3B-209ENST00000442653 TLR5O60602 858 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 CLSTN1O94985 981 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 YEATS4O95619 227 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 C4BPAP04003 597 aaKnown RBP8.82□□□□□ -1
TOP3B-209ENST00000442653 HOXB2P14652 356 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 AFMP43652 599 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 DLG4P78352 724 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 RPL6Q02878 288 aaKnown RBP8.82□□□□□ -1
TOP3B-209ENST00000442653 STK4Q13043 487 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 SEMA3BQ13214 749 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 FOXD4L6Q3SYB3 417 aaPredicted RBP8.82□□□□□ -1
TOP3B-209ENST00000442653 ZNF667Q5HYK9 610 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 SPDYCQ5MJ68 293 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 FOXD4L5Q5VV16 416 aaPredicted RBP8.82□□□□□ -1
TOP3B-209ENST00000442653 BTBD8Q5XKL5 378 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 SLC23A3Q6PIS1 610 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 FOXD4L3Q6VB84 417 aaPredicted RBP8.82□□□□□ -1
TOP3B-209ENST00000442653 TOGARAM2Q6ZUX3 1019 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 PIP4P1Q86T03 277 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 C12orf29Q8N999 325 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 KIAA0895Q8NCT3 520 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 OR2I1PQ8NGU4 316 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 KCNV2Q8TDN2 545 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 FOXD4L4Q8WXT5 416 aaPredicted RBP8.82□□□□□ -1
TOP3B-209ENST00000442653 TNIP3Q96KP6 325 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 NUSAP1Q9BXS6 441 aaKnown RBP8.82□□□□□ -1
TOP3B-209ENST00000442653 NACA2Q9H009 215 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 SLC6A17Q9H1V8 727 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 MAGEF1Q9HAY2 307 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 CAPN10Q9HC96 672 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 CD93Q9NPY3 652 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 FAM49BQ9NUQ9 324 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 DMAC2Q9NW81 257 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 OSER1Q9NX31 292 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 CGNQ9P2M7 1197 aaKnown RBP8.82□□□□□ -1
TOP3B-209ENST00000442653 STARD13Q9Y3M8 1113 aa8.82□□□□□ -1
TOP3B-209ENST00000442653 SMG1Q96Q15 3661 aaKnown RBP8.82□□□□□ -1
TOP3B-209ENST00000442653 BPTFQ12830 3046 aa8.81□□□□□ -1
TOP3B-209ENST00000442653 IGHV1OR15-9A0A0B4J2B8 117 aa8.81□□□□□ -1
TOP3B-209ENST00000442653 PVALEFA0A1B0GWK0 134 aa8.81□□□□□ -1
TOP3B-209ENST00000442653 PRRT4C9JH25 899 aa8.81□□□□□ -1
TOP3B-209ENST00000442653 HHLA1C9JL84 531 aa8.81□□□□□ -1
TOP3B-209ENST00000442653 NEDD8-MDP1E9PL57 170 aa8.81□□□□□ -1
TOP3B-209ENST00000442653 K7ELQ4 463 aaPredicted RBP8.81□□□□□ -1
TOP3B-209ENST00000442653 MDM4O15151 490 aa8.81□□□□□ -1
TOP3B-209ENST00000442653 HYAL3O43820 417 aaPredicted RBP8.81□□□□□ -1
TOP3B-209ENST00000442653 KLRC4O43908 158 aa8.81□□□□□ -1
TOP3B-209ENST00000442653 CACNG3O60359 315 aa8.81□□□□□ -1
TOP3B-209ENST00000442653 ASS1P00966 412 aaKnown RBP8.81□□□□□ -1
TOP3B-209ENST00000442653 TYRP14679 529 aa8.81□□□□□ -1
TOP3B-209ENST00000442653 NDUFV2P19404 249 aa8.81□□□□□ -1
TOP3B-209ENST00000442653 NTSR1P30989 418 aa8.81□□□□□ -1
TOP3B-209ENST00000442653 HOXD12P35452 270 aa8.81□□□□□ -1
TOP3B-209ENST00000442653 ASPAP45381 313 aa8.81□□□□□ -1
TOP3B-209ENST00000442653 NDST1P52848 882 aa8.81□□□□□ -1
TOP3B-209ENST00000442653 MAP3K7CLP57077 242 aa8.81□□□□□ -1
TOP3B-209ENST00000442653 FAM193AP78312 1265 aa8.81□□□□□ -1
TOP3B-209ENST00000442653 SIM1P81133 766 aaPredicted RBP8.81□□□□□ -1
TOP3B-209ENST00000442653 BYSLQ13895 437 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms