RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 TDRPQ86YL5 185 aa13.65□□□□□ -0.22
SLC48A1-201ENST00000442218 STMN2Q93045 179 aa13.65□□□□□ -0.22
SLC48A1-201ENST00000442218 CDCA5Q96FF9 252 aa13.65□□□□□ -0.22
SLC48A1-201ENST00000442218 OXNAD1Q96HP4 312 aaPredicted RBP13.65□□□□□ -0.22
SLC48A1-201ENST00000442218 OTOFQ9HC10 1997 aa13.65□□□□□ -0.22
SLC48A1-201ENST00000442218 LDHAP00338 332 aaKnown RBP13.65□□□□□ -0.22
SLC48A1-201ENST00000442218 DLDP09622 509 aaKnown RBP13.65□□□□□ -0.22
SLC48A1-201ENST00000442218 KCNA4P22459 653 aa13.65□□□□□ -0.22
SLC48A1-201ENST00000442218 ATXN3P54252 364 aaPredicted RBP13.65□□□□□ -0.22
SLC48A1-201ENST00000442218 TTLL12Q14166 644 aaPredicted RBP13.65□□□□□ -0.22
SLC48A1-201ENST00000442218 GPR162Q16538 588 aa13.65□□□□□ -0.22
SLC48A1-201ENST00000442218 HSF5Q4G112 596 aaPredicted RBP13.65□□□□□ -0.22
SLC48A1-201ENST00000442218 ZNF667Q5HYK9 610 aa13.65□□□□□ -0.22
SLC48A1-201ENST00000442218 BBS12Q6ZW61 710 aa13.65□□□□□ -0.22
SLC48A1-201ENST00000442218 C7orf31Q8N865 590 aa13.65□□□□□ -0.22
SLC48A1-201ENST00000442218 NDRG1Q92597 394 aaKnown RBP13.65□□□□□ -0.22
SLC48A1-201ENST00000442218 ACO2Q99798 780 aaKnown RBP13.65□□□□□ -0.22
SLC48A1-201ENST00000442218 SIX4Q9UIU6 781 aa13.65□□□□□ -0.22
SLC48A1-201ENST00000442218 BPTFQ12830 3046 aa13.65□□□□□ -0.23
SLC48A1-201ENST00000442218 WDR90Q96KV7 1748 aa13.65□□□□□ -0.23
SLC48A1-201ENST00000442218 LOC100653049A0A140TA62 436 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 CCDC22O60826 627 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 KRT34O76011 436 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 EPHB1P54762 984 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 KLHL38Q2WGJ6 581 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 CLEC4CQ8WTT0 213 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 MRPL4Q9BYD3 311 aaKnown RBP13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 RNPEPQ9H4A4 650 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 TMPRSS4Q9NRS4 437 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 STYXL1Q9Y6J8 313 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 PRR5-ARHGAP8B1AHC4 643 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 PDE5AO76074 875 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 TNNC2P02585 160 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 POLE2P56282 527 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 RPL10AP62906 217 aaKnown RBP13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 ARHGAP8P85298 464 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 SLC25A3Q00325 362 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 CDK16Q00536 496 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 SH3D19Q5HYK7 790 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 VWA5B1Q5TIE3 1220 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 CCNJLQ8IV13 435 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 NDUFAF2Q8N183 169 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 C1orf127Q8N9H9 656 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 RBM15BQ8NDT2 890 aaKnown RBP13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 PPP1R14CQ8TAE6 165 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 INPP5DQ92835 1189 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 DDX56Q9NY93 547 aaKnown RBP13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 SENP1Q9P0U3 644 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 ARHGAP42A6NI28 874 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 SIGLEC16A6NMB1 481 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 GPR25O00155 361 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 NOP56O00567 594 aaKnown RBP13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 FAM189A1O60320 539 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 VTNP04004 478 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 KRT7P08729 469 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 POLR2BP30876 1174 aaKnown RBP13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 RABGGTBP53611 331 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 YWHAZP63104 245 aaKnown RBP13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 JADE1Q6IE81 842 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 WDR49Q8IV35 697 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 TEX9Q8N6V9 391 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 SLC4A11Q8NBS3 891 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 PTCD3Q96EY7 689 aaKnown RBP13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 HOXC10Q9NYD6 342 aa13.64□□□□□ -0.23
SLC48A1-201ENST00000442218 PTPRFP10586 1907 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 WDR81Q562E7 1941 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 TRIP11Q15643 1979 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 IQANK1A0A1B0GTG1 560 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 LACTBL1A8MY62 500 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 OGTO15294 1046 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 DKC1O60832 514 aaKnown RBP eCLIP13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 TRUB2O95900 331 aaKnown RBP13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 ZBED1O96006 694 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 CD1EP15812 388 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 SESN2P58004 480 aaPredicted RBP13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 MRPS5P82675 430 aaKnown RBP13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 GBE1Q04446 702 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 PPP2R5DQ14738 602 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 CCDC142Q17RM4 750 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 GLRA4Q5JXX5 417 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 ATF7IP2Q5U623 682 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 FAM183BPQ6ZVS7 135 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 ILDR2Q71H61 639 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 LMNTD2Q8IXW0 634 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 SEPT10Q9P0V9 454 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 EVPLQ92817 2033 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 MCM3APO60318 1980 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 ZBTB42B2RXF5 422 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 ATP5HO75947 161 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 STK10O94804 968 aaKnown RBP13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 METTL18O95568 372 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 CYP3A5P20815 502 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 ETV4P43268 484 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 IREB2P48200 963 aaKnown RBP13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 YWHAEP62258 255 aaKnown RBP13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 PTPN11Q06124 597 aaPredicted RBP13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 PRKD1Q15139 912 aaPredicted RBP13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 TSNAXIP1Q2TAA8 658 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 NUDCD3Q8IVD9 361 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 UBR7Q8N806 425 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms