RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 DDX56Q9NY93 547 aaKnown RBP21.04■□□□□ 0.96
SHOX2-203ENST00000441443 PACSIN3Q9UKS6 424 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 INPP5FQ9Y2H2 1132 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 ZMPSTE24O75844 475 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 AOC1P19801 751 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 PTGER2P43116 358 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 NADK2Q4G0N4 442 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 RSPH3Q86UC2 560 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.04■□□□□ 0.96
SHOX2-203ENST00000441443 A0A0J9YVX5 310 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 RFPL1O75677 317 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 KRT37O76014 449 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 C4BPAP04003 597 aaKnown RBP21.04■□□□□ 0.96
SHOX2-203ENST00000441443 EIF3EP60228 445 aaKnown RBP21.04■□□□□ 0.96
SHOX2-203ENST00000441443 STX3Q13277 289 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 SH2D4BQ5SQS7 431 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 MAP3K21Q5TCX8 1036 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 CLEC4DQ8WXI8 215 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 PHF12Q96QT6 1004 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 RMDN3Q96TC7 470 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 TRIM56Q9BRZ2 755 aaKnown RBP21.04■□□□□ 0.96
SHOX2-203ENST00000441443 CDH22Q9UJ99 828 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 POMPQ9Y244 141 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 NUB1Q9Y5A7 615 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 A0A0B4J269 797 aa21.03■□□□□ 0.96
SHOX2-203ENST00000441443 PMLP29590 882 aa21.03■□□□□ 0.96
SHOX2-203ENST00000441443 PTPN7P35236 360 aa21.03■□□□□ 0.96
SHOX2-203ENST00000441443 COPAP53621 1224 aa21.03■□□□□ 0.96
SHOX2-203ENST00000441443 TBL3Q12788 808 aaKnown RBP21.03■□□□□ 0.96
SHOX2-203ENST00000441443 PRKG1Q13976 671 aa21.03■□□□□ 0.96
SHOX2-203ENST00000441443 TBCCQ15814 346 aa21.03■□□□□ 0.96
SHOX2-203ENST00000441443 PPP1R14CQ8TAE6 165 aa21.03■□□□□ 0.96
SHOX2-203ENST00000441443 UBAP1Q9NZ09 502 aa21.03■□□□□ 0.96
SHOX2-203ENST00000441443 PCNTO95613 3336 aa21.03■□□□□ 0.96
SHOX2-203ENST00000441443 ITM2AO43736 263 aa21.03■□□□□ 0.96
SHOX2-203ENST00000441443 CCNT2O60583 730 aaKnown RBP21.03■□□□□ 0.96
SHOX2-203ENST00000441443 RBP3P10745 1247 aa21.03■□□□□ 0.96
SHOX2-203ENST00000441443 NLRP11P59045 1033 aaKnown RBP21.03■□□□□ 0.96
SHOX2-203ENST00000441443 DEFB107AQ8IZN7 70 aa21.03■□□□□ 0.96
SHOX2-203ENST00000441443 NDUFAF2Q8N183 169 aa21.03■□□□□ 0.96
SHOX2-203ENST00000441443 SYTL5Q8TDW5 730 aaPredicted RBP21.03■□□□□ 0.96
SHOX2-203ENST00000441443 XAB2Q9HCS7 855 aaKnown RBP21.03■□□□□ 0.96
SHOX2-203ENST00000441443 NDUFA13Q9P0J0 144 aa21.03■□□□□ 0.96
SHOX2-203ENST00000441443 SLC9A2Q9UBY0 812 aa21.03■□□□□ 0.96
SHOX2-203ENST00000441443 PCSK1NQ9UHG2 260 aa21.03■□□□□ 0.96
SHOX2-203ENST00000441443 LZTS1Q9Y250 596 aa21.03■□□□□ 0.96
SHOX2-203ENST00000441443 MAD1L1Q9Y6D9 718 aa21.03■□□□□ 0.96
SHOX2-203ENST00000441443 RPL5P46777 297 aaKnown RBP21.02■□□□□ 0.96
SHOX2-203ENST00000441443 BTKQ06187 659 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 MROH9Q5TGP6 573 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 C1orf228Q6PIY5 440 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 RFX6Q8HWS3 928 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 AGO4Q9HCK5 861 aaKnown RBP21.02■□□□□ 0.96
SHOX2-203ENST00000441443 APPL1Q9UKG1 709 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 DNAJC16Q9Y2G8 782 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 TTLL3Q9Y4R7 772 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 SNNO75324 88 aaPredicted RBP21.02■□□□□ 0.96
SHOX2-203ENST00000441443 ATP6V1G1O75348 118 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 TMED1Q13445 227 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 ITGA9Q13797 1035 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 GK3PQ14409 553 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 PIGHQ14442 188 aaPredicted RBP21.02■□□□□ 0.96
SHOX2-203ENST00000441443 FAXCQ5TGI0 409 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 NPNTQ6UXI9 565 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 FAM83AQ86UY5 434 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 ZFP28Q8NHY6 868 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 SNRNP27Q8WVK2 155 aaKnown RBP21.02■□□□□ 0.96
SHOX2-203ENST00000441443 ZNF778Q96MU6 729 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 C17orf75Q9HAS0 396 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 TMEM165Q9HC07 324 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 SMYD2Q9NRG4 433 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 DTNAQ9Y4J8 743 aa21.02■□□□□ 0.96
SHOX2-203ENST00000441443 SPDYE16A6NNV3 312 aaPredicted RBP21.02■□□□□ 0.95
SHOX2-203ENST00000441443 DESP17661 470 aa21.02■□□□□ 0.95
SHOX2-203ENST00000441443 PSMA2P25787 234 aa21.02■□□□□ 0.95
SHOX2-203ENST00000441443 RFC1P35251 1148 aaPredicted RBP21.02■□□□□ 0.95
SHOX2-203ENST00000441443 FDFT1P37268 417 aa21.02■□□□□ 0.95
SHOX2-203ENST00000441443 GALK1P51570 392 aa21.02■□□□□ 0.95
SHOX2-203ENST00000441443 TAF5Q15542 800 aa21.02■□□□□ 0.95
SHOX2-203ENST00000441443 TMEM259Q4ZIN3 620 aa21.02■□□□□ 0.95
SHOX2-203ENST00000441443 CEP70Q8NHQ1 597 aa21.02■□□□□ 0.95
SHOX2-203ENST00000441443 EPB41L1Q9H4G0 881 aa21.02■□□□□ 0.95
SHOX2-203ENST00000441443 RPAP3Q9H6T3 665 aaPredicted RBP21.02■□□□□ 0.95
SHOX2-203ENST00000441443 TCRBV5S1A1TA0A578 114 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 BPGMP07738 259 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 TUBB3Q13509 450 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 ANGEL2Q5VTE6 544 aaKnown RBP21.01■□□□□ 0.95
SHOX2-203ENST00000441443 ARHGEF16Q5VV41 709 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 BBS12Q6ZW61 710 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 ANO5Q75V66 913 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 ARFGAP1Q8N6T3 406 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 AGBL3Q8NEM8 1001 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 ATG4CQ96DT6 458 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 SYNPO2Q9UMS6 1093 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 MAGEB3O15480 346 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 C1QAP02745 245 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 PCSK6P29122 969 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 HSD17B4P51659 736 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 WASHC5Q12768 1159 aa21.01■□□□□ 0.95
SHOX2-203ENST00000441443 NBPF12Q5TAG4 269 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms