RNA–Protein interactions for RNA: ENST00000441298.5

ZNF3-209, Transcript of zinc finger protein 3, humanhuman

TSL 4

Gene ZNF3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-209ENST00000441298 NAT16Q8N8M0 369 aa13.45□□□□□ -0.26
ZNF3-209ENST00000441298 RBBP8NLQ8NC74 664 aaPredicted RBP13.45□□□□□ -0.26
ZNF3-209ENST00000441298 NDRG1Q92597 394 aaKnown RBP13.45□□□□□ -0.26
ZNF3-209ENST00000441298 EZH1Q92800 747 aaPredicted RBP13.45□□□□□ -0.26
ZNF3-209ENST00000441298 BHMTQ93088 406 aa13.45□□□□□ -0.26
ZNF3-209ENST00000441298 IPO9Q96P70 1041 aaKnown RBP13.45□□□□□ -0.26
ZNF3-209ENST00000441298 CRACR2AQ9BSW2 395 aa13.45□□□□□ -0.26
ZNF3-209ENST00000441298 ULBP1Q9BZM6 244 aa13.45□□□□□ -0.26
ZNF3-209ENST00000441298 FAM124BQ9H5Z6 455 aaPredicted RBP13.45□□□□□ -0.26
ZNF3-209ENST00000441298 CYLDQ9NQC7 956 aa13.45□□□□□ -0.26
ZNF3-209ENST00000441298 DNMT3LQ9UJW3 386 aa13.45□□□□□ -0.26
ZNF3-209ENST00000441298 VPS13AQ96RL7 3174 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 KIAA1549LQ6ZVL6 1849 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 ANTXRLA6NF34 631 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 NEDD8-MDP1E9PL57 170 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 O00370 1275 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 XPO1O14980 1071 aaKnown RBP13.44□□□□□ -0.26
ZNF3-209ENST00000441298 APODP05090 189 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 LCP1P13796 627 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 RGS7P49802 495 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 YWHAGP61981 247 aaKnown RBP eCLIP13.44□□□□□ -0.26
ZNF3-209ENST00000441298 EFEMP1Q12805 493 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 GAB4Q2WGN9 574 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 DPCR1Q3MIW9 517 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 HSP90AA4PQ58FG1 418 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 RHBDF2Q6PJF5 856 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 FOXR2Q6PJQ5 311 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 TPGS1Q6ZTW0 290 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 SFTPA1Q8IWL2 248 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 KIAA2013Q8IYS2 634 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 ADGRG2Q8IZP9 1017 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 UBR7Q8N806 425 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 RUBCNQ92622 972 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 NELL1Q92832 810 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 SECISBP2LQ93073 1101 aaKnown RBP13.44□□□□□ -0.26
ZNF3-209ENST00000441298 ACDQ96AP0 544 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 KLF16Q9BXK1 252 aaPredicted RBP13.44□□□□□ -0.26
ZNF3-209ENST00000441298 EPC1Q9H2F5 836 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 ARHGEF4Q9NR80 690 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.44□□□□□ -0.26
ZNF3-209ENST00000441298 GMEB2Q9UKD1 530 aa13.44□□□□□ -0.26
ZNF3-209ENST00000441298 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.43□□□□□ -0.26
ZNF3-209ENST00000441298 PMM2O15305 246 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 LILRB5O75023 590 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 ZBED1O96006 694 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 PAEPP09466 180 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 TIE1P35590 1138 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 USP8P40818 1118 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 PSEN1P49768 467 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 MARSP56192 900 aaKnown RBP13.43□□□□□ -0.26
ZNF3-209ENST00000441298 GAD2Q05329 585 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 SIM2Q14190 667 aaPredicted RBP13.43□□□□□ -0.26
ZNF3-209ENST00000441298 DMC1Q14565 340 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 MAMSTRQ6ZN01 415 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 USP34Q70CQ2 3546 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.43□□□□□ -0.26
ZNF3-209ENST00000441298 LONP2Q86WA8 852 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 TMEM25Q86YD3 366 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 ARHGAP18Q8N392 663 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 CCDC33Q8N5R6 958 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 MLKLQ8NB16 471 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 SUMF1Q8NBK3 374 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 EHBP1Q8NDI1 1231 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 TFAP2BQ92481 460 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 OTUB2Q96DC9 234 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 GBP4Q96PP9 640 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 PNKPQ96T60 521 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 BBS2Q9BXC9 721 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 UBE2TQ9NPD8 197 aaPredicted RBP13.43□□□□□ -0.26
ZNF3-209ENST00000441298 ZDHHC4Q9NPG8 344 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 SPHK2Q9NRA0 654 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 DNAJC17Q9NVM6 304 aaKnown RBP13.43□□□□□ -0.26
ZNF3-209ENST00000441298 STRIP2Q9ULQ0 834 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 USP3Q9Y6I4 520 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 GPR179Q6PRD1 2367 aa13.43□□□□□ -0.26
ZNF3-209ENST00000441298 EP300Q09472 2414 aaPredicted RBP13.42□□□□□ -0.26
ZNF3-209ENST00000441298 SLC12A8A0AV02 714 aa13.42□□□□□ -0.26
ZNF3-209ENST00000441298 RNF225M0QZC1 329 aaPredicted RBP13.42□□□□□ -0.26
ZNF3-209ENST00000441298 PES1O00541 588 aaKnown RBP13.42□□□□□ -0.26
ZNF3-209ENST00000441298 KAT7O95251 611 aa13.42□□□□□ -0.26
ZNF3-209ENST00000441298 PAPSS2O95340 614 aaPredicted RBP13.42□□□□□ -0.26
ZNF3-209ENST00000441298 SETSIPP0DME0 302 aa13.42□□□□□ -0.26
ZNF3-209ENST00000441298 CORO1AP31146 461 aaKnown RBP13.42□□□□□ -0.26
ZNF3-209ENST00000441298 PLA2G4AP47712 749 aa13.42□□□□□ -0.26
ZNF3-209ENST00000441298 MESP2Q0VG99 397 aa13.42□□□□□ -0.26
ZNF3-209ENST00000441298 ARHGAP44Q17R89 818 aa13.42□□□□□ -0.26
ZNF3-209ENST00000441298 RAB41Q5JT25 222 aa13.42□□□□□ -0.26
ZNF3-209ENST00000441298 GJB7Q6PEY0 223 aa13.42□□□□□ -0.26
ZNF3-209ENST00000441298 KIAA1958Q8N8K9 716 aa13.42□□□□□ -0.26
ZNF3-209ENST00000441298 LMO3Q8TAP4 145 aa13.42□□□□□ -0.26
ZNF3-209ENST00000441298 RNF139Q8WU17 664 aa13.42□□□□□ -0.26
ZNF3-209ENST00000441298 EDEM1Q92611 657 aa13.42□□□□□ -0.26
ZNF3-209ENST00000441298 KREMEN1Q96MU8 473 aa13.42□□□□□ -0.26
ZNF3-209ENST00000441298 CDK5RAP1Q96SZ6 601 aaKnown RBP13.42□□□□□ -0.26
ZNF3-209ENST00000441298 CLIC5Q9NZA1 410 aa13.42□□□□□ -0.26
ZNF3-209ENST00000441298 MARCH2Q9P0N8 246 aa13.42□□□□□ -0.26
ZNF3-209ENST00000441298 DACH1Q9UI36 760 aa13.42□□□□□ -0.26
ZNF3-209ENST00000441298 USP18Q9UMW8 372 aa13.42□□□□□ -0.26
ZNF3-209ENST00000441298 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.42□□□□□ -0.26
ZNF3-209ENST00000441298 TBC1D3BA6NDS4 549 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms