RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 MXRA8Q9BRK3 442 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 RNPEPQ9H4A4 650 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 ANLNQ9NQW6 1124 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 PI4KBQ9UBF8 816 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 ZC3H7BQ9UGR2 993 aaKnown RBP13.89□□□□□ -0.19
ACTN1-204ENST00000438964 CROCCQ5TZA2 2017 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 TMX2-CTNND1H3BSU7 103 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 H7C0C1 242 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 NEMP1O14524 444 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 SIN3BO75182 1162 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 SERPINB5P36952 375 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 ALDH1A3P47895 512 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 ATP5OP48047 213 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 GCNT1Q02742 428 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 PPM1LQ5SGD2 360 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 GPAT2Q6NUI2 795 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 GPD1LQ8N335 351 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 KCTD6Q8NC69 237 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 DGCR14Q96DF8 476 aaKnown RBP13.88□□□□□ -0.19
ACTN1-204ENST00000438964 CEP170P1Q96L14 293 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 GPATCH2LQ9NWQ4 482 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 STX16-NPEPL1H3BU86 382 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 CSDE1O75534 798 aaKnown RBP13.88□□□□□ -0.19
ACTN1-204ENST00000438964 RFPL1O75677 317 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 CST3P01034 146 aaPredicted RBP13.88□□□□□ -0.19
ACTN1-204ENST00000438964 VIL1P09327 827 aaKnown RBP13.88□□□□□ -0.19
ACTN1-204ENST00000438964 ADORA2AP29274 412 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 SLC5A2P31639 672 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 ARRB2P32121 409 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 CCR3P51677 355 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 TEX44Q53QW1 395 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 FASTKD1Q53R41 847 aaKnown RBP13.88□□□□□ -0.19
ACTN1-204ENST00000438964 TSHZ1Q6ZSZ6 1077 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 TMEM179Q6ZVK1 233 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 MAVSQ7Z434 540 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 LDHDQ86WU2 507 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 TRIM11Q96F44 468 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 MARK4Q96L34 752 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 SEMA6AQ9H2E6 1030 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 ABCA3Q99758 1704 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 DHX15O43143 795 aaKnown RBP13.88□□□□□ -0.19
ACTN1-204ENST00000438964 AMHP03971 560 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 SRGAP2CP0DJJ0 459 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 SRGAP2BP0DMP2 458 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 IMPDH2P12268 514 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 CD19P15391 556 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 FDFT1P37268 417 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 SLC18A2Q05940 514 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 PPM1JQ5JR12 505 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 TRAPPC3LQ5T215 181 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 B3GNT6Q6ZMB0 384 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 ANO5Q75V66 913 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 ZSCAN18Q8TBC5 510 aaPredicted RBP13.88□□□□□ -0.19
ACTN1-204ENST00000438964 NKD2Q969F2 451 aaPredicted RBP13.88□□□□□ -0.19
ACTN1-204ENST00000438964 KCND2Q9NZV8 630 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 TBC1D30Q9Y2I9 924 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 SCINQ9Y6U3 715 aa13.88□□□□□ -0.19
ACTN1-204ENST00000438964 CLRN2A0PK11 232 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 SDR42E2A6NKP2 422 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 WDR64B1ANS9 1081 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 TCP10L2B9ZVM9 353 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 CCNE2O96020 404 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 CDKL1Q00532 357 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 MYBPC1Q00872 1141 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 PLOD1Q02809 727 aaPredicted RBP13.87□□□□□ -0.19
ACTN1-204ENST00000438964 MYBPC2Q14324 1141 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 SLC26A11Q86WA9 606 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 TFB1MQ8WVM0 346 aaKnown RBP13.87□□□□□ -0.19
ACTN1-204ENST00000438964 MIS12Q9H081 205 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 SSU72Q9NP77 194 aaKnown RBP13.87□□□□□ -0.19
ACTN1-204ENST00000438964 ZNF510Q9Y2H8 683 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 H3BNX3 289 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 ADCY6O43306 1168 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 DNAJA2O60884 412 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 FKBP6O75344 327 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 CRTAMO95727 393 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 ITGAXP20702 1163 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 RAP1GAPP47736 663 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 LIG4P49917 911 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 MTMR1Q13613 665 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 TTC39BQ5VTQ0 682 aaPredicted RBP13.87□□□□□ -0.19
ACTN1-204ENST00000438964 ATG16L1Q676U5 607 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 ADGRF2Q8IZF7 708 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 TNS4Q8IZW8 715 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 STKLD1Q8NE28 680 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 TFAP2BQ92481 460 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 TMEM143Q96AN5 459 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 MFSD14AQ96MC6 490 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 DCUN1D5Q9BTE7 237 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 HAPLN2Q9GZV7 340 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 TUT1Q9H6E5 874 aaKnown RBP13.87□□□□□ -0.19
ACTN1-204ENST00000438964 BLOC1S6Q9UL45 172 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 APOBEC2Q9Y235 224 aaKnown RBP13.87□□□□□ -0.19
ACTN1-204ENST00000438964 DRG1Q9Y295 367 aaKnown RBP13.87□□□□□ -0.19
ACTN1-204ENST00000438964 TTLL3Q9Y4R7 772 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 AP4B1Q9Y6B7 739 aa13.87□□□□□ -0.19
ACTN1-204ENST00000438964 HMX2A2RU54 273 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 LRCH4O75427 683 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 SERPINA6P08185 405 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 SNRPAP09012 282 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms