RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 SV2AQ7L0J3 742 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 GPRIN1Q7Z2K8 1008 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 PIP4P1Q86T03 277 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 ACOT1Q86TX2 421 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 UNC93AQ86WB7 457 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 TMEFF1Q8IYR6 380 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 GRAMD1CQ8IYS0 662 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 SLC2A14Q8TDB8 520 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 TMC2Q8TDI7 906 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 TAF4BQ92750 862 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 GATA6Q92908 595 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 P2RY11Q96G91 374 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 GABRG3Q99928 467 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 KLF16Q9BXK1 252 aaPredicted RBP11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 ADAM33Q9BZ11 813 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 FBXO44Q9H4M3 255 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 CAPN10Q9HC96 672 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 PNPLA8Q9NP80 782 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 CALCOCO1Q9P1Z2 691 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 BCCIPQ9P287 314 aaKnown RBP eCLIP11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 DEC1Q9P2X7 70 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 SCML2Q9UQR0 700 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 PLXND1Q9Y4D7 1925 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 ATXN2Q99700 1313 aaKnown RBP11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 IGF2RP11717 2491 aa11.58□□□□□ -0.56
SPTLC1P4-201ENST00000435997 CHD6Q8TD26 2715 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 IGHV1OR15-9A0A0B4J2B8 117 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 TBC1D3BA6NDS4 549 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 PDXKO00764 312 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 IKBKBO14920 756 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 MAPK13O15264 365 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 F13A1P00488 732 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 SLFN14P0C7P3 912 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 ZSCAN22P10073 491 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 PDIA4P13667 645 aaKnown RBP11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 HOXB2P14652 356 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 ENGP17813 658 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 ITPKAP23677 461 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 AFMP43652 599 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 CLCN6P51797 869 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 MAP3K7CLP57077 242 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 SEMA3BQ13214 749 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 ORC1Q13415 861 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 SGSM1Q2NKQ1 1148 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 BTBD8Q5XKL5 378 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 EGFLAMQ63HQ2 1017 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 ATL3Q6DD88 541 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 ARMCX6Q7L4S7 300 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 TTC30AQ86WT1 665 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 NAT16Q8N8M0 369 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 C12orf29Q8N999 325 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 TWNKQ96RR1 684 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 HNRNPABQ99729 332 aaKnown RBP11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 MED10Q9BTT4 135 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 NUSAP1Q9BXS6 441 aaKnown RBP11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 TLR8Q9NR97 1041 aaKnown RBP11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 FAM13BQ9NYF5 915 aa11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 TNRC6BQ9UPQ9 1833 aaKnown RBP11.57□□□□□ -0.56
SPTLC1P4-201ENST00000435997 PCDH15Q96QU1 1955 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 PRRT4C9JH25 899 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 CYP26A1O43174 497 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 AP5Z1O43299 807 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 TBX18O95935 607 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 TOP3BO95985 862 aaKnown RBP11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 NR3C1P04150 777 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 FAM200BP0CF97 657 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 IRF1P10914 325 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 P4HA1P13674 534 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 NDUFV2P19404 249 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 SPINK2P20155 84 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 NTSR1P30989 418 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 ME1P48163 572 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 MCCD1P59942 119 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 FOXC1Q12948 553 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 PKP1Q13835 747 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 NFIL3Q16649 462 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 ANO4Q32M45 955 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 KMT5BQ4FZB7 885 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 GRAMD4Q6IC98 578 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 SPOPLQ6IQ16 392 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 KIAA1211LQ6NV74 962 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 SLC41A1Q8IVJ1 513 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 ZNF276Q8N554 614 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 DEFB124Q8NES8 71 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 NUP205Q92621 2012 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 PAGE5Q96GU1 130 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 ACOX2Q99424 681 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 APOBEC3GQ9HC16 384 aaKnown RBP11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 FAM49BQ9NUQ9 324 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 EXOC1Q9NV70 894 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 DNAJC17Q9NVM6 304 aaKnown RBP11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 FBXO10Q9UK96 956 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 TRAF3IP3Q9Y228 551 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 PCDHA5Q9Y5H7 936 aa11.56□□□□□ -0.56
SPTLC1P4-201ENST00000435997 CACNA1EQ15878 2313 aa11.55□□□□□ -0.56
SPTLC1P4-201ENST00000435997 TMEM8BA6NDV4 472 aa11.55□□□□□ -0.56
SPTLC1P4-201ENST00000435997 NEDD8-MDP1E9PL57 170 aa11.55□□□□□ -0.56
SPTLC1P4-201ENST00000435997 CILPO75339 1184 aa11.55□□□□□ -0.56
SPTLC1P4-201ENST00000435997 ZNF217O75362 1048 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms