RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ITGADQ13349 1161 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 NFIXQ14938 502 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 NDUFAF6Q330K2 333 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 GPRASP2Q96D09 838 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 MAGED4Q96JG8 741 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 CPVLQ9H3G5 476 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 ALG13Q9NP73 1137 aaKnown RBP11.53□□□□□ -0.56
SCN4A-201ENST00000435607 A0A087WWV3 80 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 NDUFB10O96000 172 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 VAV1P15498 845 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 SERPINB8P50452 374 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 FBXO42Q6P3S6 717 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 FAM20CQ8IXL6 584 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 ASZ1Q8WWH4 475 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 ATP6V1G3Q96LB4 118 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 RERGLQ9H628 205 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 CCDC177Q9NQR7 707 aaPredicted RBP11.53□□□□□ -0.56
SCN4A-201ENST00000435607 RUVBL2Q9Y230 463 aaKnown RBP11.53□□□□□ -0.56
SCN4A-201ENST00000435607 STX11O75558 287 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 GCATO75600 419 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 SLC25A12O75746 678 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 HLA-DQA2P01906 255 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 MARSP56192 900 aaKnown RBP11.53□□□□□ -0.56
SCN4A-201ENST00000435607 ZNF543Q08ER8 600 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 MDH1BQ5I0G3 518 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 CCDC149Q6ZUS6 474 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 IKBIPQ70UQ0 350 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 SLFN11Q7Z7L1 901 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 TERB1Q8NA31 727 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 FEZF2Q8TBJ5 459 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 KLHL25Q9H0H3 589 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 ATXN3LQ9H3M9 355 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 LY9Q9HBG7 655 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 VTA1Q9NP79 307 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 KLK14Q9P0G3 267 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 KLHL18O94889 574 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 NUDT2P50583 147 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 CSNK2BP67870 215 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 TYW3Q6IPR3 259 aaKnown RBP11.53□□□□□ -0.56
SCN4A-201ENST00000435607 LRRC74BQ6ZQY2 392 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 PPIL6Q8IXY8 311 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 TBC1D16Q8TBP0 767 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 GPT2Q8TD30 523 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 BPIFA3Q9BQP9 254 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 ACTR8Q9H981 624 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 POLD4Q9HCU8 107 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.53□□□□□ -0.56
SCN4A-201ENST00000435607 MTMR4Q9NYA4 1195 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 POLG2Q9UHN1 485 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 VAV3Q9UKW4 847 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 STARD13Q9Y3M8 1113 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 PPP2R3BQ9Y5P8 575 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 URADA6NGE7 173 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 FGFR4P22455 802 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 LRRC14Q15048 493 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 PABPC1LQ4VXU2 614 aaKnown RBP11.53□□□□□ -0.56
SCN4A-201ENST00000435607 BSNDQ8WZ55 320 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 AIFM3Q96NN9 605 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 ARIH1Q9Y4X5 557 aaPredicted RBP11.53□□□□□ -0.56
SCN4A-201ENST00000435607 CBX4O00257 560 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 NMT2O60551 498 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 PIK3R1P27986 724 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 PDK2Q15119 407 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 NFIL3Q16649 462 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 GATAD2AQ86YP4 633 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 TMEM199Q8N511 208 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 PRR12Q9ULL5 1215 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 PCDHB5Q9Y5E4 795 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 TAF4O00268 1085 aa11.52□□□□□ -0.56
SCN4A-201ENST00000435607 NCAM2O15394 837 aa11.52□□□□□ -0.56
SCN4A-201ENST00000435607 RBP1P09455 135 aa11.52□□□□□ -0.56
SCN4A-201ENST00000435607 GTF2H1P32780 548 aa11.52□□□□□ -0.56
SCN4A-201ENST00000435607 ARHGDIBP52566 201 aa11.52□□□□□ -0.56
SCN4A-201ENST00000435607 NFRKBQ6P4R8 1299 aa11.52□□□□□ -0.56
SCN4A-201ENST00000435607 SLC35G2Q8TBE7 412 aa11.52□□□□□ -0.56
SCN4A-201ENST00000435607 KCNV2Q8TDN2 545 aa11.52□□□□□ -0.56
SCN4A-201ENST00000435607 LRRC39Q96DD0 335 aa11.52□□□□□ -0.56
SCN4A-201ENST00000435607 OSBPL8Q9BZF1 889 aa11.52□□□□□ -0.56
SCN4A-201ENST00000435607 HPCAL1P37235 193 aa11.52□□□□□ -0.56
SCN4A-201ENST00000435607 SLC22A9Q8IVM8 553 aa11.52□□□□□ -0.56
SCN4A-201ENST00000435607 MRPL39Q9NYK5 338 aaKnown RBP11.52□□□□□ -0.56
SCN4A-201ENST00000435607 TEX33O43247 280 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 SERPINH1P50454 418 aaKnown RBP11.52□□□□□ -0.57
SCN4A-201ENST00000435607 ARHGAP28Q9P2N2 729 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 RBM7Q9Y580 266 aaKnown RBP11.52□□□□□ -0.57
SCN4A-201ENST00000435607 PIPSLA2A3N6 862 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 TUFMP49411 452 aaKnown RBP11.52□□□□□ -0.57
SCN4A-201ENST00000435607 HNRNPH2P55795 449 aaKnown RBP11.52□□□□□ -0.57
SCN4A-201ENST00000435607 CASP12Q6UXS9 341 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 AGGF1Q8N302 714 aaeCLIP11.52□□□□□ -0.57
SCN4A-201ENST00000435607 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.52□□□□□ -0.57
SCN4A-201ENST00000435607 ACSF2Q96CM8 615 aaPredicted RBP11.52□□□□□ -0.57
SCN4A-201ENST00000435607 PANX3Q96QZ0 392 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 HDHD2Q9H0R4 259 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 KCNN2Q9H2S1 579 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 RRN3Q9NYV6 651 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 V9GYQ6 96 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 CDK12Q9NYV4 1490 aaPredicted RBP11.52□□□□□ -0.57
SCN4A-201ENST00000435607 TBC1D3BA6NDS4 549 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 FAM25AB3EWG3 89 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms