RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 ZBED1O96006 694 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 APOEP02649 317 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 RPSAP08865 295 aaKnown RBP14.19□□□□□ -0.14
COL6A3-207ENST00000433762 IL4RP24394 825 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 EPHB2P29323 1055 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 TTLL4Q14679 1199 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 SLC10A6Q3KNW5 377 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 PRAMEF18Q5VWM3 479 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 ZNF449Q6P9G9 518 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 OLFML1Q6UWY5 402 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 TRIM50Q86XT4 487 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 PQLC3Q8N755 202 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 RFWD2Q8NHY2 731 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 PTPRN2Q92932 1015 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 TMEM120AQ9BXJ8 343 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 C10orf88Q9H8K7 445 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 ETNK2Q9NVF9 386 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 SIRPGQ9P1W8 387 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 HEY2Q9UBP5 337 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 ZC3H7BQ9UGR2 993 aaKnown RBP14.19□□□□□ -0.14
COL6A3-207ENST00000433762 TSPAN16Q9UKR8 245 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 MCM3APO60318 1980 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 I3L4J1 428 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 PYGBP11216 843 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 NDST1P52848 882 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 OSTNP61366 133 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 SLC6A3Q01959 620 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 NAB1Q13506 487 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 BLMHQ13867 455 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 CCDC14Q49A88 953 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 OR6B2Q6IFH4 312 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 TRNP1Q6NT89 227 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 APBB1IPQ7Z5R6 666 aaPredicted RBP14.19□□□□□ -0.14
COL6A3-207ENST00000433762 TMEM192Q8IY95 271 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 NAF1Q96HR8 494 aaKnown RBP14.19□□□□□ -0.14
COL6A3-207ENST00000433762 FAM111AQ96PZ2 611 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 SRPK1Q96SB4 655 aaKnown RBP14.19□□□□□ -0.14
COL6A3-207ENST00000433762 MROH8Q9H579 483 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 PLEKHA5Q9HAU0 1116 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 STOML1Q9UBI4 398 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 SORCS3Q9UPU3 1222 aa14.19□□□□□ -0.14
COL6A3-207ENST00000433762 SCN4AP35499 1836 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 ASB14A6NK59 587 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 FAM159BA6NKW6 160 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 A8MXQ7 604 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 E5RJQ4 531 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 KCNN4O15554 427 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 PFKMP08237 780 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 CYP2C8P10632 490 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 MLNP12872 115 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 ACADSP16219 412 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 SDC4P31431 198 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 PSMC4P43686 418 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 CLCN3P51790 818 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 MMRN1Q13201 1228 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 NAA25Q14CX7 972 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 DPYSL2Q16555 572 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 ZC3H18Q86VM9 953 aaKnown RBP14.18□□□□□ -0.14
COL6A3-207ENST00000433762 UNC93AQ86WB7 457 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 HACE1Q8IYU2 909 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 GPC2Q8N158 579 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 SHCBP1Q8NEM2 672 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 GSDMBQ8TAX9 411 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 ACMSDQ8TDX5 336 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 DENND2DQ9H6A0 471 aaPredicted RBP14.18□□□□□ -0.14
COL6A3-207ENST00000433762 DPP3Q9NY33 737 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 PDCD11Q14690 1871 aaKnown RBP14.18□□□□□ -0.14
COL6A3-207ENST00000433762 TRIM49D1C9J1S8 452 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 IQCF3P0C7M6 154 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 CYP3A5P20815 502 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 ATP6V1C1P21283 382 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 LAMC2Q13753 1193 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 KCTD2Q14681 263 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 TAF11Q15544 211 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 TSNAXIP1Q2TAA8 658 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 DCAF4L1Q3SXM0 396 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 MAP1SQ66K74 1059 aaPredicted RBP14.18□□□□□ -0.14
COL6A3-207ENST00000433762 ARHGAP17Q68EM7 881 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 NPNTQ6UXI9 565 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 CAND1Q86VP6 1230 aaKnown RBP14.18□□□□□ -0.14
COL6A3-207ENST00000433762 CCNJLQ8IV13 435 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 EMID1Q96A84 441 aaPredicted RBP14.18□□□□□ -0.14
COL6A3-207ENST00000433762 OXNAD1Q96HP4 312 aaPredicted RBP14.18□□□□□ -0.14
COL6A3-207ENST00000433762 MIPEPQ99797 713 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 CADM1Q9BY67 442 aaKnown RBP14.18□□□□□ -0.14
COL6A3-207ENST00000433762 STN1Q9H668 368 aaKnown RBP14.18□□□□□ -0.14
COL6A3-207ENST00000433762 RCOR3Q9P2K3 495 aaPredicted RBP14.18□□□□□ -0.14
COL6A3-207ENST00000433762 CORO1CQ9ULV4 474 aaPredicted RBP14.18□□□□□ -0.14
COL6A3-207ENST00000433762 FZD1Q9UP38 647 aa14.18□□□□□ -0.14
COL6A3-207ENST00000433762 A0A0G2JND7 137 aa14.17□□□□□ -0.14
COL6A3-207ENST00000433762 SLC15A5A6NIM6 579 aa14.17□□□□□ -0.14
COL6A3-207ENST00000433762 HACD1B0YJ81 288 aa14.17□□□□□ -0.14
COL6A3-207ENST00000433762 HGSO14964 777 aaPredicted RBP14.17□□□□□ -0.14
COL6A3-207ENST00000433762 PPP1R12AO14974 1030 aaPredicted RBP14.17□□□□□ -0.14
COL6A3-207ENST00000433762 GSC2O15499 205 aa14.17□□□□□ -0.14
COL6A3-207ENST00000433762 MAGEC1O60732 1142 aa14.17□□□□□ -0.14
COL6A3-207ENST00000433762 GM2AP17900 193 aa14.17□□□□□ -0.14
COL6A3-207ENST00000433762 CRHR1P34998 444 aa14.17□□□□□ -0.14
COL6A3-207ENST00000433762 GRM5P41594 1212 aa14.17□□□□□ -0.14
COL6A3-207ENST00000433762 RPL34P49207 117 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms