RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 RBM5P52756 815 aaKnown RBP eCLIP6.77□□□□□ -1.33
USP54-206ENST00000433394 BLOC1S1P78537 153 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 FAM189BP81408 668 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 UBE3AQ05086 875 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 BFSP2Q13515 415 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 GRM4Q14833 912 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 SF3B3Q15393 1217 aaKnown RBP6.77□□□□□ -1.33
USP54-206ENST00000433394 TBCCQ15814 346 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 FAM110CQ1W6H9 321 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 RSRC2Q7L4I2 434 aaKnown RBP6.77□□□□□ -1.33
USP54-206ENST00000433394 MAATS1Q7Z4T9 603 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 TRABD2AQ86V40 505 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 CEP70Q8NHQ1 597 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 SSH3Q8TE77 659 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 SOCS4Q8WXH5 440 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 SKA1Q96BD8 255 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 REXO5Q96IC2 774 aaKnown RBP6.77□□□□□ -1.33
USP54-206ENST00000433394 FBXL20Q96IG2 436 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 COG8Q96MW5 612 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 SLC26A6Q9BXS9 759 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 CCDC134Q9H6E4 229 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 WASH6PQ9NQA3 447 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 SMPD4Q9NXE4 827 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 EHD3Q9NZN3 535 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 DAPP1Q9UN19 280 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 UBE2J1Q9Y385 318 aaPredicted RBP6.77□□□□□ -1.33
USP54-206ENST00000433394 TESMINQ9Y4I5 508 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 UNC119BA6NIH7 251 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 A8MVJ9 347 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 E7EVH7 732 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 J3KRW8 73 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 PEX11BO96011 259 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 LMNAP02545 664 aaKnown RBP6.76□□□□□ -1.33
USP54-206ENST00000433394 CASP2P42575 452 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 CDK7P50613 346 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 PRKAA2P54646 552 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 SF3A3Q12874 501 aaKnown RBP eCLIP6.76□□□□□ -1.33
USP54-206ENST00000433394 SEMA3BQ13214 749 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 TRIM60Q495X7 471 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 NRN1LQ496H8 165 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 USP39Q53GS9 565 aaKnown RBP6.76□□□□□ -1.33
USP54-206ENST00000433394 TREML2Q5T2D2 321 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 FAAH2Q6GMR7 532 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 SUGP1Q8IWZ8 645 aaKnown RBP6.76□□□□□ -1.33
USP54-206ENST00000433394 PALM2Q8IXS6 379 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 ESX1Q8N693 406 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 R3HDM4Q96D70 268 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 WWC2-AS2Q96NR7 200 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 WDR24Q96S15 920 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 ZNF703Q9H7S9 590 aaPredicted RBP6.76□□□□□ -1.33
USP54-206ENST00000433394 SNX15Q9NRS6 342 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 RASSF1Q9NS23 344 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 FZD1Q9UP38 647 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 CNTN6Q9UQ52 1028 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 TMEM98Q9Y2Y6 226 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 DERAQ9Y315 318 aa6.76□□□□□ -1.33
USP54-206ENST00000433394 ADM5C9JUS6 153 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 EIF5BO60841 1220 aaKnown RBP6.75□□□□□ -1.33
USP54-206ENST00000433394 TAF5LO75529 589 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 SPDEFO95238 335 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 TFRCP02786 760 aaKnown RBP6.75□□□□□ -1.33
USP54-206ENST00000433394 POLBP06746 335 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 ITGAMP11215 1152 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 ELF1P32519 619 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 VAMP2P63027 116 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 RNASELQ05823 741 aaKnown RBP6.75□□□□□ -1.33
USP54-206ENST00000433394 MAPK7Q13164 816 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 G3BP1Q13283 466 aaKnown RBP eCLIP6.75□□□□□ -1.33
USP54-206ENST00000433394 BMPR2Q13873 1038 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 ACOX1Q15067 660 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 LY6KQ17RY6 165 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 NBPF8Q3BBV2 869 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 TMEM196Q5HYL7 178 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 KCNV1Q6PIU1 500 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 LRRC71Q8N4P6 559 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 SIRT6Q8N6T7 355 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 USP38Q8NB14 1042 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 SUPT20HQ8NEM7 779 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 MYCBPAPQ8TBZ2 947 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 HAS1Q92839 578 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 DVL3Q92997 716 aaPredicted RBP6.75□□□□□ -1.33
USP54-206ENST00000433394 FUBP1Q96AE4 644 aaKnown RBP6.75□□□□□ -1.33
USP54-206ENST00000433394 MAELQ96JY0 434 aaKnown RBP6.75□□□□□ -1.33
USP54-206ENST00000433394 PLEKHG4BQ96PX9 1271 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 HAPLN3Q96S86 360 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 KRTAP4-7Q9BYR0 210 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 VPS16Q9H269 839 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 CHODLQ9H9P2 273 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 KLC4Q9NSK0 619 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 IFT80Q9P2H3 777 aaPredicted RBP6.75□□□□□ -1.33
USP54-206ENST00000433394 SUFUQ9UMX1 484 aa6.75□□□□□ -1.33
USP54-206ENST00000433394 TMEM200CA6NKL6 621 aa6.74□□□□□ -1.33
USP54-206ENST00000433394 YY2O15391 372 aa6.74□□□□□ -1.33
USP54-206ENST00000433394 HOXC11O43248 304 aaPredicted RBP6.74□□□□□ -1.33
USP54-206ENST00000433394 TMPRSS11DO60235 418 aa6.74□□□□□ -1.33
USP54-206ENST00000433394 TSPAN3O60637 253 aa6.74□□□□□ -1.33
USP54-206ENST00000433394 RPP40O75818 363 aaKnown RBP6.74□□□□□ -1.33
USP54-206ENST00000433394 CER1O95813 267 aa6.74□□□□□ -1.33
USP54-206ENST00000433394 FESP07332 822 aa6.74□□□□□ -1.33
USP54-206ENST00000433394 CREB1P16220 341 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms