RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 TCEA2Q15560 299 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 KBTBD12Q3ZCT8 623 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 NUDT18Q6ZVK8 323 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 CYP4Z1Q86W10 505 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 APOBEC3FQ8IUX4 373 aaKnown RBP11.76□□□□□ -0.53
SEC16A-206ENST00000431893 FAM120BQ96EK7 910 aaKnown RBP11.76□□□□□ -0.53
SEC16A-206ENST00000431893 GRIP2Q9C0E4 1043 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 NIF3L1Q9GZT8 377 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 OSGEPL1Q9H4B0 414 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 PCDHB7Q9Y5E2 793 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 TAF4O00268 1085 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 ALDH1A3P47895 512 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 CCNG1P51959 295 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 ANKS6Q68DC2 871 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 FAM172AQ8WUF8 416 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 NSUN4Q96CB9 384 aaKnown RBP11.76□□□□□ -0.53
SEC16A-206ENST00000431893 SAMD9Q5K651 1589 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 ZSCAN5CA6NGD5 496 aaPredicted RBP11.76□□□□□ -0.53
SEC16A-206ENST00000431893 YWHAQP27348 245 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 NOS3P29474 1203 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 IL12RB1P42701 662 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 KCNJ6P48051 423 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 PEX5P50542 639 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 NCKAP1LP55160 1127 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 OOSP2Q86WS3 158 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 RSPH9Q9H1X1 276 aaPredicted RBP11.76□□□□□ -0.53
SEC16A-206ENST00000431893 NT5MQ9NPB1 228 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 ENTPD7Q9NQZ7 604 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 KLHL3Q9UH77 587 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 WDR27A2RRH5 827 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 IL18RAPO95256 599 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 HPGDP15428 266 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 LBPP18428 481 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 FDFT1P37268 417 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 GRIK3Q13003 919 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 FGD3Q5JSP0 725 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 TDRD10Q5VZ19 366 aaKnown RBP11.76□□□□□ -0.53
SEC16A-206ENST00000431893 LINC00523Q86TU6 105 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 MYO1HQ8N1T3 1032 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 NEDD1Q8NHV4 660 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 ENKURQ8TC29 256 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 CELF6Q96J87 481 aaKnown RBP11.76□□□□□ -0.53
SEC16A-206ENST00000431893 MOV10L1Q9BXT6 1211 aaKnown RBP11.76□□□□□ -0.53
SEC16A-206ENST00000431893 SH3BP4Q9P0V3 963 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 POLR1AO95602 1720 aaPredicted RBP11.76□□□□□ -0.53
SEC16A-206ENST00000431893 ROBO2Q9HCK4 1378 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.75□□□□□ -0.53
SEC16A-206ENST00000431893 CD4P01730 458 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 ACADSBP45954 432 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 ZNF177Q13360 481 aaPredicted RBP11.75□□□□□ -0.53
SEC16A-206ENST00000431893 DGCR6Q14129 220 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 C3orf67Q6ZVT6 689 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 EFCAB3Q8N7B9 438 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 ATP8B4Q8TF62 1192 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 MYLK2Q9H1R3 596 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 PRR12Q9ULL5 1215 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 PPIEQ9UNP9 301 aaKnown RBP11.75□□□□□ -0.53
SEC16A-206ENST00000431893 TP73O15350 636 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 PHGDHO43175 533 aaKnown RBP11.75□□□□□ -0.53
SEC16A-206ENST00000431893 ZNF189O75820 626 aaPredicted RBP11.75□□□□□ -0.53
SEC16A-206ENST00000431893 AP1G2O75843 785 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 FGFR1P11362 822 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 ACO1P21399 889 aaKnown RBP11.75□□□□□ -0.53
SEC16A-206ENST00000431893 ITGADQ13349 1161 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 POU6F1Q14863 301 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 KBTBD2Q8IY47 623 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 RNASE11Q8TAA1 199 aaKnown RBP11.75□□□□□ -0.53
SEC16A-206ENST00000431893 TBCDQ9BTW9 1192 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 GPAMQ9HCL2 828 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 ADAM30Q9UKF2 790 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 GEMP55040 296 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 SOX10P56693 466 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 PLCL1Q15111 1095 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 STILQ15468 1287 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 BTN2A1Q7KYR7 527 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 EFL1Q7Z2Z2 1120 aaKnown RBP11.75□□□□□ -0.53
SEC16A-206ENST00000431893 SENP6Q9GZR1 1112 aaPredicted RBP11.75□□□□□ -0.53
SEC16A-206ENST00000431893 ZFYVE1Q9HBF4 777 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 TBX20Q9UMR3 447 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 TDRKHQ9Y2W6 561 aaKnown RBP11.75□□□□□ -0.53
SEC16A-206ENST00000431893 F8VZ95 297 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 ANXA9O76027 345 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 CTDNEP1O95476 244 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 CBX6O95503 412 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 VTNP04004 478 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 ZNF37AP17032 561 aaPredicted RBP11.75□□□□□ -0.53
SEC16A-206ENST00000431893 C21orf59P57076 290 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 LSM3P62310 102 aaKnown RBP11.75□□□□□ -0.53
SEC16A-206ENST00000431893 NR6A1Q15406 480 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 ATG9AQ7Z3C6 839 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 PYDC1Q8WXC3 89 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 EPB41L4AQ9HCS5 686 aaPredicted RBP11.75□□□□□ -0.53
SEC16A-206ENST00000431893 COMMD8Q9NX08 183 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 ZMYND8Q9ULU4 1186 aaPredicted RBP11.75□□□□□ -0.53
SEC16A-206ENST00000431893 SDR42E2A6NKP2 422 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 CPA3P15088 417 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 GARTP22102 1010 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 MAGEA10P43363 369 aaPredicted RBP11.75□□□□□ -0.53
SEC16A-206ENST00000431893 PKNOX1P55347 436 aa11.75□□□□□ -0.53
SEC16A-206ENST00000431893 ALX1Q15699 326 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms