RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 PDHA1P08559 390 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 FAM163BP0C2L3 166 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 LAG3P18627 525 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 MCM5P33992 734 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 PBX1P40424 430 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 RXRGP48443 463 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 PAPOLAP51003 745 aaKnown RBP3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 VAMP2P63027 116 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 MPP1Q00013 466 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 TP53BP2Q13625 1128 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 DCTN1Q14203 1278 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 CSHL1Q14406 222 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 PTPRRQ15256 657 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 SF3B3Q15393 1217 aaKnown RBP3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 CYP1B1Q16678 543 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 GALNTL6Q49A17 601 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 ATPAF1Q5TC12 328 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 GRHL2Q6ISB3 625 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 RETSATQ6NUM9 610 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 RINT1Q6NUQ1 792 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 PCGF5Q86SE9 256 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 C2CD5Q86YS7 1000 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 KRTAP19-1Q8IUB9 90 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 ZNF276Q8N554 614 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 PAF1Q8N7H5 531 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 SLC2A12Q8TD20 617 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 SLC25A43Q8WUT9 341 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 WDR60Q8WVS4 1066 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 ASB10Q8WXI3 467 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 OVCA2Q8WZ82 227 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 GLG1Q92896 1179 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 EXTL1Q92935 676 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 MCRS1Q96EZ8 462 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 TRAPPC9Q96Q05 1148 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 BDH2Q9BUT1 245 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 NRDE2Q9H7Z3 1164 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 PI4KBQ9UBF8 816 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 STEAP1Q9UHE8 339 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 SLC13A4Q9UKG4 626 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 USP22Q9UPT9 525 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 PIPSLA2A3N6 862 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 EFCAB8A8MWE9 144 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 EXOC5O00471 708 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 KIAA0355O15063 1070 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 SNX2O60749 519 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 RHOBTB3O94955 611 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 LARGE1O95461 756 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 VNN1O95497 513 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 CER1O95813 267 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 POLBP06746 335 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 RHOP08100 348 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 IL6RP08887 468 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 CD19P15391 556 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 GKP32189 559 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 LIPAP38571 399 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 MAGEA10P43363 369 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 TUBP50607 506 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 FAM3BP58499 235 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 CHRNDQ07001 517 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 EFEMP1Q12805 493 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 NFIXQ14938 502 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 TMEM196Q5HYL7 178 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 ZNF618Q5T7W0 954 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 TEDDM1Q5T9Z0 273 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 DGAT2L7PQ6IED9 249 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 CLEC9AQ6UXN8 241 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 RNF207Q6ZRF8 634 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 RINLQ6ZS11 566 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 RASGRP2Q7LDG7 609 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 SLC22A17Q8WUG5 538 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 ATRIPQ8WXE1 791 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 LOXL4Q96JB6 756 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 PGBD1Q96JS3 809 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 MAELQ96JY0 434 aaKnown RBP3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 NPAS1Q99742 590 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 THAP7Q9BT49 309 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 MECRQ9BV79 373 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 ALG8Q9BVK2 526 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 TPSD1Q9BZJ3 242 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 UNC45AQ9H3U1 944 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 DEF6Q9H4E7 631 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 GLOD4Q9HC38 313 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 UBN1Q9NPG3 1134 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 VPS45Q9NRW7 570 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 KLC4Q9NSK0 619 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 PARPBPQ9NWS1 579 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 KCTD5Q9NXV2 234 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 NDUFAF4Q9P032 175 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 TSC22D4Q9Y3Q8 395 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 CCDC180Q9P1Z9 1646 aa3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 SETD1BQ9UPS6 1966 aaKnown RBP3.61□□□□□ -1.83
HMGB1P27-201ENST00000431429 HMX3A6NHT5 357 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 UNC119BA6NIH7 251 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 K7ESM1 405 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 MPPED1O15442 326 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 PPP6R2O75170 966 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 PMPCBO75439 489 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 ONECUT2O95948 504 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 MBPP02686 304 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 C1SP09871 688 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms