RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 SLC15A2Q16348 729 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 LRRC8DQ7L1W4 858 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 ADGRE3Q9BY15 652 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 DSEQ9UL01 958 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 A2ML1A8K2U0 1454 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 DLGAP3O95886 979 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 ATP6AP1LQ52LC2 224 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 RRAGCQ9HB90 399 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 MIEF1Q9NQG6 463 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 USP18Q9UMW8 372 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 ABCA8O94911 1581 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 ATP6V1C1P21283 382 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 DSG3P32926 999 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 SGCGQ13326 291 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 TFDP3Q5H9I0 405 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 CGRRF1Q99675 332 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 TMEM121Q9BTD3 319 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 C17orf75Q9HAS0 396 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 PHTF1Q9UMS5 762 aa15.86■□□□□ 0.13
PTPRF-206ENST00000429895 A0A1B0GW55 424 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 MT-CO1P00395 513 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 DUX4L2P0CJ85 424 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 DUX4L3P0CJ86 424 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 DUX4L4P0CJ87 422 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 DUX4L5P0CJ88 424 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 DUX4L6P0CJ89 424 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 DUX4L7P0CJ90 424 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 CXCL8P10145 99 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 CCNG1P51959 295 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 MYL6P60660 151 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 ERO1BQ86YB8 467 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 CD302Q8IX05 232 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 DNAJB3Q8WWF6 145 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 GPAMQ9HCL2 828 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 STMN3Q9NZ72 180 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 DUX4Q9UBX2 424 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 MORC2Q9Y6X9 1032 aaPredicted RBP15.85■□□□□ 0.13
PTPRF-206ENST00000429895 A8MX80 341 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 ACAT1P24752 427 aaKnown RBP15.85■□□□□ 0.13
PTPRF-206ENST00000429895 LHX1P48742 406 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 PDK2Q15119 407 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 ZSWIM2Q8NEG5 633 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 CASKIN2Q8WXE0 1202 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 PXMP2Q9NR77 195 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 TLR8Q9NR97 1041 aaKnown RBP15.85■□□□□ 0.13
PTPRF-206ENST00000429895 MRGBPQ9NV56 204 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 HEY2Q9UBP5 337 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 GTF3C4Q9UKN8 822 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 FBXL21Q9UKT6 434 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 CYP11B1P15538 503 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 TRIM71Q2Q1W2 868 aaKnown RBP15.85■□□□□ 0.13
PTPRF-206ENST00000429895 COMMD2Q86X83 199 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 CCDC103Q8IW40 242 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 WDR41Q9HAD4 459 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 N6AMT1Q9Y5N5 214 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 PDZK1P1A8MUH7 402 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 F9P00740 461 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 HSD17B3P37058 310 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 KBTBD12Q3ZCT8 623 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 CAMKK1Q8N5S9 505 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 LRRC40Q9H9A6 602 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 MROH8Q9H579 483 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 ELOVL6Q9H5J4 265 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 SYBUQ9NX95 663 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 SOX13Q9UN79 622 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 SNX13Q9Y5W8 968 aa15.85■□□□□ 0.13
PTPRF-206ENST00000429895 SERPINB3P29508 390 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 CHRNB3Q05901 458 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 IRAK1BP1Q5VVH5 260 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 ITIH5Q86UX2 942 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 TMEM176AQ96HP8 235 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 PPP1R10Q96QC0 940 aaKnown RBP15.84■□□□□ 0.13
PTPRF-206ENST00000429895 ROGDIQ9GZN7 287 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 ATXN3LQ9H3M9 355 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 POLLQ9UGP5 575 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 MMRN1Q13201 1228 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 SLC47A2Q86VL8 602 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 NFIAQ12857 509 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 ACOX1Q15067 660 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.84■□□□□ 0.13
PTPRF-206ENST00000429895 GLMNQ92990 594 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 NACC2Q96BF6 587 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 PACSIN1Q9BY11 444 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 TMEM39AQ9NV64 488 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 DNAJC16Q9Y2G8 782 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 HSMCR30P0CW71 290 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 SLC2A4P14672 509 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 TPH1P17752 444 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 LAMTOR4Q0VGL1 99 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 NBPF12Q5TAG4 269 aaPredicted RBP15.84■□□□□ 0.13
PTPRF-206ENST00000429895 DEFB132Q7Z7B7 95 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 PLA2R1Q13018 1463 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 ZCCHC11Q5TAX3 1644 aaKnown RBP15.84■□□□□ 0.13
PTPRF-206ENST00000429895 PYGMP11217 842 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 FDPSP14324 419 aaKnown RBP15.84■□□□□ 0.13
PTPRF-206ENST00000429895 SERPINB1P30740 379 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 LRRC34Q8IZ02 419 aa15.84■□□□□ 0.13
PTPRF-206ENST00000429895 NOA1Q8NC60 698 aaKnown RBP15.84■□□□□ 0.13
PTPRF-206ENST00000429895 AHCYL2Q96HN2 611 aaKnown RBP15.84■□□□□ 0.13
PTPRF-206ENST00000429895 VIPAS39Q9H9C1 493 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms