RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 NAA25Q14CX7 972 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 PDK2Q15119 407 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 STILQ15468 1287 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 DBN1Q16643 649 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 TSNAXIP1Q2TAA8 658 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 ACCSLQ4AC99 568 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 SH3D19Q5HYK7 790 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 ZNF667Q5HYK9 610 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 ZBTB41Q5SVQ8 909 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 TREML2Q5T2D2 321 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 DAB2IPQ5VWQ8 1189 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 MPZL3Q6UWV2 235 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 TSHZ1Q6ZSZ6 1077 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 SEPT14Q6ZU15 432 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 LONP2Q86WA8 852 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 RFX6Q8HWS3 928 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 RHPN2Q8IUC4 686 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 LMNTD2Q8IXW0 634 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 C4orf33Q8N1A6 199 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 GLIS1Q8NBF1 620 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 FBXO36Q8NEA4 188 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 RAB3IL1Q8TBN0 382 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 STK32AQ8WU08 396 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 MZB1Q8WU39 189 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 DCAKDQ8WVC6 231 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 USP6NLQ92738 828 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 ELMO3Q96BJ8 720 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 LRRC39Q96DD0 335 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 MCRS1Q96EZ8 462 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 NSL1Q96IY1 281 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 FAM118BQ9BPY3 351 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 LRFN3Q9BTN0 628 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 BCO2Q9BYV7 579 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 MMADHCQ9H3L0 296 aaPredicted RBP9.06□□□□□ -0.96
GABPB1-205ENST00000429662 SYNCQ9H7C4 482 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 DCLRE1BQ9H816 532 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 VRTNQ9H8Y1 702 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 KLHL11Q9NVR0 708 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 SLC5A4Q9NY91 659 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 PAK5Q9P286 719 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 XPO7Q9UIA9 1087 aaKnown RBP9.06□□□□□ -0.96
GABPB1-205ENST00000429662 ZNF180Q9UJW8 692 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 L3MBTL1Q9Y468 752 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 LRRC37A2A6NM11 1700 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 IGKV6-21A0A0C4DH24 114 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 A0A1W2PPM1 405 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 FOXO6A8MYZ6 492 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 ZNF487B1APH4 448 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 C3orf80F5H4A9 247 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 ACKR2O00590 384 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 LPXNO60711 386 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 LGR5O75473 907 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 ENDOD1O94919 500 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 TRUB2O95900 331 aaKnown RBP9.05□□□□□ -0.96
GABPB1-205ENST00000429662 IGHA2P01877 340 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 INHBAP08476 426 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 RPSAP08865 295 aaKnown RBP9.05□□□□□ -0.96
GABPB1-205ENST00000429662 DHRS4L1P0CG22 281 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 VDRP11473 427 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 CD19P15391 556 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 GNAZP19086 355 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 EDNRBP24530 442 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 ITGB8P26012 769 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 CCND3P30281 292 aaPredicted RBP9.05□□□□□ -0.96
GABPB1-205ENST00000429662 RFC1P35251 1148 aaPredicted RBP9.05□□□□□ -0.96
GABPB1-205ENST00000429662 ASPAP45381 313 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 ARFIP2P53365 341 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 ZNF200P98182 395 aaPredicted RBP9.05□□□□□ -0.96
GABPB1-205ENST00000429662 ROR1Q01973 937 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 SP2Q02086 613 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 POU5F1BQ06416 359 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 CACNB2Q08289 660 aaPredicted RBP9.05□□□□□ -0.96
GABPB1-205ENST00000429662 FASTKD3Q14CZ7 662 aaKnown RBP9.05□□□□□ -0.96
GABPB1-205ENST00000429662 ANKRD20A2Q5SQ80 823 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 ANKRD20A1Q5TYW2 823 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 TTC39BQ5VTQ0 682 aaPredicted RBP9.05□□□□□ -0.96
GABPB1-205ENST00000429662 ANKRD20A3Q5VUR7 823 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 ATG16L1Q676U5 607 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 DENND1BQ6P3S1 775 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 METTL7BQ6UX53 244 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 PLPPR4Q7Z2D5 763 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 PRUNE1Q86TP1 453 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.05□□□□□ -0.96
GABPB1-205ENST00000429662 TCP10LQ8TDR4 215 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 AFG1LQ8WV93 481 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 SLC44A1Q8WWI5 657 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 PRPF31Q8WWY3 499 aaKnown RBP9.05□□□□□ -0.96
GABPB1-205ENST00000429662 HAUS1Q96CS2 278 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 SLC7A6OSQ96CW6 309 aaPredicted RBP9.05□□□□□ -0.96
GABPB1-205ENST00000429662 MTBPQ96DY7 904 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 THOC1Q96FV9 657 aaKnown RBP9.05□□□□□ -0.96
GABPB1-205ENST00000429662 APOPT1Q96IL0 206 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 UHRF1Q96T88 793 aaPredicted RBP9.05□□□□□ -0.96
GABPB1-205ENST00000429662 TSSK1BQ9BXA7 367 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 TBC1D10AQ9BXI6 508 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 MTMR12Q9C0I1 747 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 XYLT2Q9H1B5 865 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 RPF1Q9H9Y2 349 aaKnown RBP9.05□□□□□ -0.96
GABPB1-205ENST00000429662 MKS1Q9NXB0 559 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 STOML1Q9UBI4 398 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms