RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 GRAMD4Q6IC98 578 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 TSHZ1Q6ZSZ6 1077 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 PLPPR4Q7Z2D5 763 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 ADGRA1Q86SQ6 560 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 LENG1Q96BZ8 264 aaPredicted RBP7.51□□□□□ -1.21
CNOT4-206ENST00000428680 KDM4CQ9H3R0 1056 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 SMIM35A0A1B0GVV1 85 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 MIF4GDA9UHW6 222 aaKnown RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 RAMP2O60895 175 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 C8AP07357 584 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 HPGDP15428 266 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 CXCR2P25025 360 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 KCNA1Q09470 495 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 PDAP1Q13442 181 aaKnown RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 LGI2Q8N0V4 545 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 GPATCH11Q8N954 259 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 STMN2Q93045 179 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 ACDQ96AP0 544 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 MCUR1Q96AQ8 359 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 CXorf40BQ96DE9 158 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 VMP1Q96GC9 406 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 TRIM9Q9C026 710 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 FAM114A2Q9NRY5 505 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 LZTS1Q9Y250 596 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 SLC27A5Q9Y2P5 690 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 HES2Q9Y543 173 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 CNTNAP5Q8WYK1 1306 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 PGRMC1O00264 195 aaKnown RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 PIK3CDO00329 1044 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 RASGRF2O14827 1237 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 PER2O15055 1255 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 GSTA4O15217 222 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 TREHO43280 583 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 NOL3O60936 208 aaKnown RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 SETSIPP0DME0 302 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 GFAPP14136 432 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 CASP1P29466 404 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 OR1E1P30953 314 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 RAP1GDS1P52306 607 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 PURAQ00577 322 aaKnown RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 TGM3Q08188 693 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 COLEC12Q5KU26 742 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 HP1BP3Q5SSJ5 553 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 MMS22LQ6ZRQ5 1243 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 TRAPPC11Q7Z392 1133 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 SYTL1Q8IYJ3 562 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 ENOX1Q8TC92 643 aaKnown RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 SPPL2BQ8TCT7 592 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 MGARPQ8TDB4 240 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 EDEM1Q92611 657 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 UHRF1Q96T88 793 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 DESI2Q9BSY9 194 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 TRMT61BQ9BVS5 477 aaKnown RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 ADGRE3Q9BY15 652 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 NSUN3Q9H649 340 aaKnown RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 PMPCBO75439 489 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 KRT37O76014 449 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 CYP2A6P11509 494 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 PTPN3P26045 913 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 MZF1P28698 734 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 RENBPP51606 427 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 ARL4CP56559 192 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 P3H1Q32P28 736 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 SETMARQ53H47 684 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 ZPBP2Q6X784 338 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 CHMP1BQ7LBR1 199 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 TTC7BQ86TV6 843 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 C10orf67Q8IYJ2 551 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 TRPV1Q8NER1 839 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 BLOC1S5Q8TDH9 187 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 SLC20A1Q8WUM9 679 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 SPIRE2Q8WWL2 714 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 OTUB1Q96FW1 271 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 ARHGEF4Q9NR80 690 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 DNAJC17Q9NVM6 304 aaKnown RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 DNMT3LQ9UJW3 386 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 GTF3C4Q9UKN8 822 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 VPS9D1Q9Y2B5 631 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 SLC16A3O15427 465 aaKnown RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 GPD1P21695 349 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 CTNNA1P35221 906 aaKnown RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 GUCA1AP43080 201 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 SESN2P58004 480 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 SMARCB1Q12824 385 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 ORC1Q13415 861 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 TOMM20Q15388 145 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 FASTKD1Q53R41 847 aaKnown RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 KLHL35Q6PF15 583 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 TBC1D1Q86TI0 1168 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 NAT16Q8N8M0 369 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 ZBTB9Q96C00 473 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 RIOX1Q9H6W3 641 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 CEP72Q9P209 647 aa7.5□□□□□ -1.21
CNOT4-206ENST00000428680 GPN3Q9UHW5 284 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-206ENST00000428680 TBC1D4O60343 1298 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 ITGAXP20702 1163 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 BRD2P25440 801 aaKnown RBP7.49□□□□□ -1.21
CNOT4-206ENST00000428680 ZNF75DP51815 510 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 RRP1BQ14684 758 aaKnown RBP7.49□□□□□ -1.21
CNOT4-206ENST00000428680 INSCQ1MX18 579 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms