RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 EIF2DP41214 584 aaKnown RBP19.38■□□□□ 0.69
GPC1-205ENST00000427506 PLA2G4AP47712 749 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 TKTL1P51854 596 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 BCAT1P54687 386 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 KDSRQ06136 332 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 KCNH2Q12809 1159 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 DMC1Q14565 340 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 LAIR1Q6GTX8 287 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 TMEM270Q6UE05 265 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 HTR3DQ70Z44 454 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 SYT13Q7L8C5 426 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.38■□□□□ 0.69
GPC1-205ENST00000427506 SCD5Q86SK9 330 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 TTC30AQ86WT1 665 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 MIB1Q86YT6 1006 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 CREBRFQ8IUR6 639 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 ARHGAP18Q8N392 663 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 NAT16Q8N8M0 369 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 VPS13AQ96RL7 3174 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 LRRC4Q9HBW1 653 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 ARHGEF4Q9NR80 690 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 SPHK2Q9NRA0 654 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 CLIC5Q9NZA1 410 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 KIAA1257Q9ULG3 409 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 MYO16Q9Y6X6 1858 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 KAT7O95251 611 aa19.37■□□□□ 0.69
GPC1-205ENST00000427506 AFPP02771 609 aaKnown RBP19.37■□□□□ 0.69
GPC1-205ENST00000427506 PDE4CQ08493 712 aa19.37■□□□□ 0.69
GPC1-205ENST00000427506 BST2Q10589 180 aaKnown RBP19.37■□□□□ 0.69
GPC1-205ENST00000427506 KLHDC10Q6PID8 442 aa19.37■□□□□ 0.69
GPC1-205ENST00000427506 RSRC2Q7L4I2 434 aaKnown RBP19.37■□□□□ 0.69
GPC1-205ENST00000427506 C12orf40Q86WS4 652 aa19.37■□□□□ 0.69
GPC1-205ENST00000427506 TMEM25Q86YD3 366 aa19.37■□□□□ 0.69
GPC1-205ENST00000427506 TRIM59Q8IWR1 403 aa19.37■□□□□ 0.69
GPC1-205ENST00000427506 GPR161Q8N6U8 529 aaKnown RBP19.37■□□□□ 0.69
GPC1-205ENST00000427506 EHBP1Q8NDI1 1231 aa19.37■□□□□ 0.69
GPC1-205ENST00000427506 UBA3Q8TBC4 463 aa19.37■□□□□ 0.69
GPC1-205ENST00000427506 USP33Q8TEY7 942 aa19.37■□□□□ 0.69
GPC1-205ENST00000427506 RASAL2Q9UJF2 1139 aa19.37■□□□□ 0.69
GPC1-205ENST00000427506 PTPRZ1P23471 2315 aaPredicted RBP19.37■□□□□ 0.69
GPC1-205ENST00000427506 CCDC163A0A0D9SF12 145 aa19.36■□□□□ 0.69
GPC1-205ENST00000427506 XPO1O14980 1071 aaKnown RBP19.36■□□□□ 0.69
GPC1-205ENST00000427506 ZBED1O96006 694 aa19.36■□□□□ 0.69
GPC1-205ENST00000427506 PAEPP09466 180 aa19.36■□□□□ 0.69
GPC1-205ENST00000427506 GRIA2P42262 883 aa19.36■□□□□ 0.69
GPC1-205ENST00000427506 ID4P47928 161 aa19.36■□□□□ 0.69
GPC1-205ENST00000427506 MARSP56192 900 aaKnown RBP19.36■□□□□ 0.69
GPC1-205ENST00000427506 PREPLQ4J6C6 727 aaPredicted RBP19.36■□□□□ 0.69
GPC1-205ENST00000427506 RAB41Q5JT25 222 aa19.36■□□□□ 0.69
GPC1-205ENST00000427506 RRAGAQ7L523 313 aa19.36■□□□□ 0.69
GPC1-205ENST00000427506 UBR7Q8N806 425 aa19.36■□□□□ 0.69
GPC1-205ENST00000427506 KAT5Q92993 513 aa19.36■□□□□ 0.69
GPC1-205ENST00000427506 DEC1Q9P2X7 70 aa19.36■□□□□ 0.69
GPC1-205ENST00000427506 RWDD2AQ9UIY3 292 aa19.36■□□□□ 0.69
GPC1-205ENST00000427506 USP18Q9UMW8 372 aa19.36■□□□□ 0.69
GPC1-205ENST00000427506 RIF1Q5UIP0 2472 aaKnown RBP19.36■□□□□ 0.69
GPC1-205ENST00000427506 FAM186AA6NE01 2351 aa19.35■□□□□ 0.69
GPC1-205ENST00000427506 TBC1D3BA6NDS4 549 aa19.35■□□□□ 0.69
GPC1-205ENST00000427506 TULP2O00295 520 aa19.35■□□□□ 0.69
GPC1-205ENST00000427506 AXIN1O15169 862 aa19.35■□□□□ 0.69
GPC1-205ENST00000427506 HOXC11O43248 304 aaPredicted RBP19.35■□□□□ 0.69
GPC1-205ENST00000427506 RPP40O75818 363 aaKnown RBP19.35■□□□□ 0.69
GPC1-205ENST00000427506 APBB3O95704 486 aa19.35■□□□□ 0.69
GPC1-205ENST00000427506 TIE1P35590 1138 aa19.35■□□□□ 0.69
GPC1-205ENST00000427506 YWHAGP61981 247 aaKnown RBP eCLIP19.35■□□□□ 0.69
GPC1-205ENST00000427506 MRPS21P82921 87 aaKnown RBP19.35■□□□□ 0.69
GPC1-205ENST00000427506 COG7P83436 770 aa19.35■□□□□ 0.69
GPC1-205ENST00000427506 EFEMP1Q12805 493 aa19.35■□□□□ 0.69
GPC1-205ENST00000427506 TPGS1Q6ZTW0 290 aa19.35■□□□□ 0.69
GPC1-205ENST00000427506 NUDT18Q6ZVK8 323 aa19.35■□□□□ 0.69
GPC1-205ENST00000427506 ZNF276Q8N554 614 aa19.35■□□□□ 0.69
GPC1-205ENST00000427506 CCDC33Q8N5R6 958 aa19.35■□□□□ 0.69
GPC1-205ENST00000427506 TSTD1Q8NFU3 115 aa19.35■□□□□ 0.69
GPC1-205ENST00000427506 LMO3Q8TAP4 145 aa19.35■□□□□ 0.69
GPC1-205ENST00000427506 GAB3Q8WWW8 586 aa19.35■□□□□ 0.69
GPC1-205ENST00000427506 IPO9Q96P70 1041 aaKnown RBP19.35■□□□□ 0.69
GPC1-205ENST00000427506 ULBP1Q9BZM6 244 aa19.35■□□□□ 0.69
GPC1-205ENST00000427506 STRIP2Q9ULQ0 834 aa19.35■□□□□ 0.69
GPC1-205ENST00000427506 ANTXRLA6NF34 631 aa19.34■□□□□ 0.69
GPC1-205ENST00000427506 NEDD8-MDP1E9PL57 170 aa19.34■□□□□ 0.69
GPC1-205ENST00000427506 O00370 1275 aa19.34■□□□□ 0.69
GPC1-205ENST00000427506 GREM1O60565 184 aa19.34■□□□□ 0.69
GPC1-205ENST00000427506 TULP3O75386 442 aa19.34■□□□□ 0.69
GPC1-205ENST00000427506 RETP07949 1114 aa19.34■□□□□ 0.69
GPC1-205ENST00000427506 HMBSP08397 361 aa19.34■□□□□ 0.69
GPC1-205ENST00000427506 SETSIPP0DME0 302 aa19.34■□□□□ 0.69
GPC1-205ENST00000427506 TNFRSF4P43489 277 aa19.34■□□□□ 0.69
GPC1-205ENST00000427506 ADIGQ0VDE8 80 aa19.34■□□□□ 0.69
GPC1-205ENST00000427506 MESP2Q0VG99 397 aa19.34■□□□□ 0.69
GPC1-205ENST00000427506 TPD52L1Q16890 204 aaPredicted RBP19.34■□□□□ 0.69
GPC1-205ENST00000427506 ARHGEF19Q8IW93 802 aa19.34■□□□□ 0.69
GPC1-205ENST00000427506 SFTPA1Q8IWL2 248 aa19.34■□□□□ 0.69
GPC1-205ENST00000427506 SIX6OS1Q8N1H7 587 aa19.34■□□□□ 0.69
GPC1-205ENST00000427506 RBBP8NLQ8NC74 664 aaPredicted RBP19.34■□□□□ 0.69
GPC1-205ENST00000427506 XPO6Q96QU8 1125 aaKnown RBP19.34■□□□□ 0.69
GPC1-205ENST00000427506 BBS2Q9BXC9 721 aa19.34■□□□□ 0.69
GPC1-205ENST00000427506 INTS2Q9H0H0 1204 aaKnown RBP19.34■□□□□ 0.69
GPC1-205ENST00000427506 WDR35Q9P2L0 1181 aa19.34■□□□□ 0.69
GPC1-205ENST00000427506 RNF225M0QZC1 329 aaPredicted RBP19.33■□□□□ 0.68
GPC1-205ENST00000427506 STC2O76061 302 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms