RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 ATL2Q8NHH9 583 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 C2orf15Q8WU43 125 aaKnown RBP8.9□□□□□ -0.98
SH3D19-204ENST00000427414 PRCCQ92733 491 aaPredicted RBP8.9□□□□□ -0.98
SH3D19-204ENST00000427414 ARMC5Q96C12 935 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 PGM2Q96G03 612 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 MCEEQ96PE7 176 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 ERP44Q9BS26 406 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 DDX23Q9BUQ8 820 aaKnown RBP8.9□□□□□ -0.98
SH3D19-204ENST00000427414 ECT2Q9H8V3 914 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 CNGB3Q9NQW8 809 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 WHRNQ9P202 907 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 HMGXB4Q9UGU5 601 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 STK38LQ9Y2H1 464 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 EME2A4GXA9 379 aaPredicted RBP8.9□□□□□ -0.98
SH3D19-204ENST00000427414 PPEF2O14830 753 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 OAZ2O95190 189 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 NPR3P17342 541 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 CCND1P24385 295 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 PSMA2P25787 234 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 PTGIRP43119 386 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 PLTPP55058 493 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 DR1Q01658 176 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 ZNF252P-AS1Q0IIN9 211 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 NOMO2Q5JPE7 1267 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 DSTYKQ6XUX3 929 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 ACOT1Q86TX2 421 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 CRIPAKQ8N1N5 446 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 PRELID2Q8N945 189 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 UHMK1Q8TAS1 419 aaKnown RBP8.9□□□□□ -0.98
SH3D19-204ENST00000427414 NKD2Q969F2 451 aaPredicted RBP8.9□□□□□ -0.98
SH3D19-204ENST00000427414 NT5C3BQ969T7 300 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 KLHL29Q96CT2 875 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 FUBP3Q96I24 572 aaKnown RBP eCLIP8.9□□□□□ -0.98
SH3D19-204ENST00000427414 SLITRK1Q96PX8 696 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 PKMYT1Q99640 499 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 APOL6Q9BWW8 343 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 OSBPL8Q9BZF1 889 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 ADAM7Q9H2U9 754 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 PABPC3Q9H361 631 aaKnown RBP8.9□□□□□ -0.98
SH3D19-204ENST00000427414 KLK14Q9P0G3 267 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 NR2E1Q9Y466 385 aa8.9□□□□□ -0.98
SH3D19-204ENST00000427414 LTBP2Q14767 1821 aa8.9□□□□□ -0.99
SH3D19-204ENST00000427414 DAB1O75553 588 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 SMNDC1O75940 238 aaKnown RBP eCLIP8.89□□□□□ -0.99
SH3D19-204ENST00000427414 GAS8O95995 478 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 NUDT17P0C025 328 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 RARAP10276 462 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 FGFR1P11362 822 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 ALADP13716 330 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 ZFXP17010 805 aaPredicted RBP8.89□□□□□ -0.99
SH3D19-204ENST00000427414 HTR7P34969 479 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 RFC1P35251 1148 aaPredicted RBP8.89□□□□□ -0.99
SH3D19-204ENST00000427414 ARSEP51690 589 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 NCALDP61601 193 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 TFDP2Q14188 446 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 SLC29A2Q14542 456 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 NPAS4Q8IUM7 802 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 KIF2BQ8N4N8 673 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 DYDC1Q8WWB3 177 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 SMARCD1Q96GM5 515 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 SH3GL3Q99963 347 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 SYT15Q9BQS2 421 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 HSFX1Q9UBD0 423 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 MAFFQ9ULX9 164 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 NME7Q9Y5B8 376 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 RAD54BQ9Y620 910 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 SF3B1O75533 1304 aaKnown RBP eCLIP8.89□□□□□ -0.99
SH3D19-204ENST00000427414 A8MUI8 341 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 SNX3O60493 162 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 LRCH4O75427 683 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 TRUB2O95900 331 aaKnown RBP8.89□□□□□ -0.99
SH3D19-204ENST00000427414 CTSHP09668 335 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 FAM200BP0CF97 657 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 CCL5P13501 91 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 ITIH2P19823 946 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 SLCO1A2P46721 670 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 RPL7AP62424 266 aaKnown RBP8.89□□□□□ -0.99
SH3D19-204ENST00000427414 PTK6Q13882 451 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 GLRA4Q5JXX5 417 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 C6orf118Q5T5N4 469 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 CD300LGQ6UXG3 332 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 SPOCD1Q6ZMY3 1216 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 C4orf50Q6ZRC1 276 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 FAM183BPQ6ZVS7 135 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 BBS12Q6ZW61 710 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 RELL1Q8IUW5 271 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 COLGALT2Q8IYK4 626 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 RNF217Q8TC41 542 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 RNF25Q96BH1 459 aaPredicted RBP8.89□□□□□ -0.99
SH3D19-204ENST00000427414 FAF2Q96CS3 445 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 SLC2A13Q96QE2 648 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 TXLNGYQ9BZA5 131 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 DCLK3Q9C098 648 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 EPB41L4BQ9H329 900 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 MIOSQ9NXC5 875 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 DDX43Q9NXZ2 648 aaKnown RBP8.89□□□□□ -0.99
SH3D19-204ENST00000427414 SNX24Q9Y343 169 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 COL4A6Q14031 1691 aa8.89□□□□□ -0.99
SH3D19-204ENST00000427414 OR6C75A6NL08 312 aa8.88□□□□□ -0.99
SH3D19-204ENST00000427414 C3orf70A6NLC5 250 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms