RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 STX1AQ16623 288 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 TCP11X2Q5H9J9 407 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 C10orf120Q5SQS8 335 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 CDKAL1Q5VV42 579 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 DPY19L2P1Q6NXN4 242 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 PMF1Q6P1K2 205 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 DENND1BQ6P3S1 775 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 C12orf40Q86WS4 652 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 MIB1Q86YT6 1006 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 BBS7Q8IWZ6 715 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 ENOX1Q8TC92 643 aaKnown RBP14.32□□□□□ -0.12
SNX3-204ENST00000426155 CLEC4CQ8WTT0 213 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 EZH1Q92800 747 aaPredicted RBP14.32□□□□□ -0.12
SNX3-204ENST00000426155 UBXN6Q9BZV1 441 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 LRRC4Q9HBW1 653 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 FANCLQ9NW38 375 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 RASAL2Q9UJF2 1139 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 CNTN6Q9UQ52 1028 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 SH3BP1Q9Y3L3 701 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 R4GN57 208 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 GTPBP10A4D1E9 387 aaKnown RBP14.31□□□□□ -0.12
SNX3-204ENST00000426155 MAP3K13O43283 966 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 LAMTOR5O43504 91 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 GREM1O60565 184 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 LETM1O95202 739 aaPredicted RBP14.31□□□□□ -0.12
SNX3-204ENST00000426155 ZBED1O96006 694 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 SP9P0CG40 484 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 GNA15P30679 374 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 ATP5C1P36542 298 aaKnown RBP14.31□□□□□ -0.12
SNX3-204ENST00000426155 USP8P40818 1118 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 MAGEA9P43362 315 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 GALK1P51570 392 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 MFAP3P55082 362 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 YWHAGP61981 247 aaKnown RBP eCLIP14.31□□□□□ -0.12
SNX3-204ENST00000426155 SATB1Q01826 763 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 CSTF1Q05048 431 aaKnown RBP14.31□□□□□ -0.12
SNX3-204ENST00000426155 MESP2Q0VG99 397 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 KCNMA1Q12791 1236 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 EFEMP1Q12805 493 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 LRRC32Q14392 662 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 DHCR24Q15392 516 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 CNGA2Q16280 664 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 TMEM196Q5HYL7 178 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 CAVIN1Q6NZI2 390 aaKnown RBP14.31□□□□□ -0.12
SNX3-204ENST00000426155 ALYREFQ86V81 257 aaKnown RBP14.31□□□□□ -0.12
SNX3-204ENST00000426155 DDX42Q86XP3 938 aaKnown RBP eCLIP14.31□□□□□ -0.12
SNX3-204ENST00000426155 P2RY13Q9BPV8 354 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 POLR3BQ9NW08 1133 aaPredicted RBP14.31□□□□□ -0.12
SNX3-204ENST00000426155 ANO10Q9NW15 660 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 KIAA1257Q9ULG3 409 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 EML5Q05BV3 1969 aa14.31□□□□□ -0.12
SNX3-204ENST00000426155 E2F8A0AVK6 867 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 YJEFN3A6XGL0 299 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 E7ENQ6 273 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 TRDMT1O14717 391 aaKnown RBP14.3□□□□□ -0.12
SNX3-204ENST00000426155 ATMINO43313 823 aaPredicted RBP14.3□□□□□ -0.12
SNX3-204ENST00000426155 THAP12O43422 761 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 HMBSP08397 361 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 EEF1GP26641 437 aaKnown RBP14.3□□□□□ -0.12
SNX3-204ENST00000426155 DEKP35659 375 aaKnown RBP14.3□□□□□ -0.12
SNX3-204ENST00000426155 OPRD1P41143 372 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 KLK7P49862 253 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 TYRO3Q06418 890 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 KRT31Q15323 416 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 CT47A1Q5JQC4 288 aaPredicted RBP14.3□□□□□ -0.12
SNX3-204ENST00000426155 LY6G5CQ5SRR4 150 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 PM20D1Q6GTS8 502 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 C1orf228Q6PIY5 440 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 RHBDF2Q6PJF5 856 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 SFTPA1Q8IWL2 248 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 ADGRG2Q8IZP9 1017 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 SIX6OS1Q8N1H7 587 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 SLC35F5Q8WV83 523 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 SHC3Q92529 594 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 EDEM1Q92611 657 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 VPS16Q9H269 839 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 PRMT8Q9NR22 394 aaPredicted RBP14.3□□□□□ -0.12
SNX3-204ENST00000426155 CLIC5Q9NZA1 410 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 CYTH4Q9UIA0 394 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 DNAJC12Q9UKB3 198 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 FHOD1Q9Y613 1164 aa14.3□□□□□ -0.12
SNX3-204ENST00000426155 FAM170AA1A519 330 aa14.29□□□□□ -0.12
SNX3-204ENST00000426155 RNF40O75150 1001 aa14.29□□□□□ -0.12
SNX3-204ENST00000426155 STC2O76061 302 aa14.29□□□□□ -0.12
SNX3-204ENST00000426155 RALAP11233 206 aa14.29□□□□□ -0.12
SNX3-204ENST00000426155 NBL1P41271 181 aa14.29□□□□□ -0.12
SNX3-204ENST00000426155 SLC6A11P48066 632 aa14.29□□□□□ -0.12
SNX3-204ENST00000426155 PSEN1P49768 467 aa14.29□□□□□ -0.12
SNX3-204ENST00000426155 MRE11P49959 708 aa14.29□□□□□ -0.12
SNX3-204ENST00000426155 DAOAP59103 153 aa14.29□□□□□ -0.12
SNX3-204ENST00000426155 KDSRQ06136 332 aa14.29□□□□□ -0.12
SNX3-204ENST00000426155 GRSF1Q12849 480 aaKnown RBP eCLIP14.29□□□□□ -0.12
SNX3-204ENST00000426155 STILQ15468 1287 aa14.29□□□□□ -0.12
SNX3-204ENST00000426155 DGKKQ5KSL6 1271 aa14.29□□□□□ -0.12
SNX3-204ENST00000426155 RSRC2Q7L4I2 434 aaKnown RBP14.29□□□□□ -0.12
SNX3-204ENST00000426155 ENOSF1Q7L5Y1 443 aa14.29□□□□□ -0.12
SNX3-204ENST00000426155 PASD1Q8IV76 773 aa14.29□□□□□ -0.12
SNX3-204ENST00000426155 AOPEPQ8N6M6 819 aa14.29□□□□□ -0.12
SNX3-204ENST00000426155 ZNF606Q8WXB4 792 aa14.29□□□□□ -0.12
SNX3-204ENST00000426155 KCTD13Q8WZ19 329 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms