RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 ZDHHC18Q9NUE0 388 aa15.68■□□□□ 0.1
CALD1-206ENST00000424922 GOLGA6L10A6NI86 522 aa15.68■□□□□ 0.1
CALD1-206ENST00000424922 C2CD4BA6NLJ0 364 aa15.68■□□□□ 0.1
CALD1-206ENST00000424922 HHLA1C9JL84 531 aa15.68■□□□□ 0.1
CALD1-206ENST00000424922 H7C4K7 107 aa15.68■□□□□ 0.1
CALD1-206ENST00000424922 TCF4P15884 667 aa15.68■□□□□ 0.1
CALD1-206ENST00000424922 PDGFRAP16234 1089 aa15.68■□□□□ 0.1
CALD1-206ENST00000424922 GPD1P21695 349 aa15.68■□□□□ 0.1
CALD1-206ENST00000424922 NFE2Q16621 373 aaPredicted RBP15.68■□□□□ 0.1
CALD1-206ENST00000424922 SLC26A9Q7LBE3 791 aa15.68■□□□□ 0.1
CALD1-206ENST00000424922 EGFL6Q8IUX8 553 aa15.68■□□□□ 0.1
CALD1-206ENST00000424922 NIPA2Q8N8Q9 360 aa15.68■□□□□ 0.1
CALD1-206ENST00000424922 DPF3Q92784 378 aa15.68■□□□□ 0.1
CALD1-206ENST00000424922 MAGOHBQ96A72 148 aaKnown RBP15.68■□□□□ 0.1
CALD1-206ENST00000424922 FMO2Q99518 471 aa15.68■□□□□ 0.1
CALD1-206ENST00000424922 DPH5Q9H2P9 285 aa15.68■□□□□ 0.1
CALD1-206ENST00000424922 GREB1Q4ZG55 1949 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 CPB1P15086 417 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 GRIK1P39086 918 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 FNTAP49354 379 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 ZNF143P52747 638 aaPredicted RBP15.67■□□□□ 0.1
CALD1-206ENST00000424922 MRPS5P82675 430 aaKnown RBP15.67■□□□□ 0.1
CALD1-206ENST00000424922 ADCY1Q08828 1119 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 RAB41Q5JT25 222 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 CEP85LQ5SZL2 805 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 AGBL2Q5U5Z8 902 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 KIAA1841Q6NSI8 718 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 RNF168Q8IYW5 571 aaPredicted RBP15.67■□□□□ 0.1
CALD1-206ENST00000424922 MAIP1Q8WWC4 291 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 CFAP57Q96MR6 1250 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 MYCBPQ99417 103 aaPredicted RBP15.67■□□□□ 0.1
CALD1-206ENST00000424922 SPG21Q9NZD8 308 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 SLC4A7Q9Y6M7 1214 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 PLXNA4Q9HCM2 1894 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 C2CD2LO14523 706 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 FSCN2O14926 492 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 EIF3HO15372 352 aaKnown RBP eCLIP15.67■□□□□ 0.1
CALD1-206ENST00000424922 TBC1D4O60343 1298 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 MYZAPP0CAP1 466 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 GJC1P36383 396 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 EIF3BP55884 814 aaKnown RBP15.67■□□□□ 0.1
CALD1-206ENST00000424922 HTRA4P83105 476 aaPredicted RBP15.67■□□□□ 0.1
CALD1-206ENST00000424922 SIX1Q15475 284 aaPredicted RBP15.67■□□□□ 0.1
CALD1-206ENST00000424922 AADACL2Q6P093 401 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 RHOT1Q8IXI2 618 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 HERVK_113Q902F9 699 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 SLCO2A1Q92959 643 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 LBHD1Q9BQE6 289 aaPredicted RBP15.67■□□□□ 0.1
CALD1-206ENST00000424922 ULBP1Q9BZM6 244 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.67■□□□□ 0.1
CALD1-206ENST00000424922 PCDHB5Q9Y5E4 795 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 CDY1Q9Y6F8 540 aa15.67■□□□□ 0.1
CALD1-206ENST00000424922 SRRM3A6NNA2 597 aaPredicted RBP15.66■□□□□ 0.1
CALD1-206ENST00000424922 LRCH4O75427 683 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 USP17L7P0C7H9 530 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 RPL17P18621 184 aaKnown RBP15.66■□□□□ 0.1
CALD1-206ENST00000424922 SCNN1AP37088 669 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 COILP38432 576 aaPredicted RBP15.66■□□□□ 0.1
CALD1-206ENST00000424922 DHX9Q08211 1270 aaKnown RBP15.66■□□□□ 0.1
CALD1-206ENST00000424922 ZNF844Q08AG5 666 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 C15orf59Q2T9L4 293 aaPredicted RBP15.66■□□□□ 0.1
CALD1-206ENST00000424922 CCDC14Q49A88 953 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 EFHC1Q5JVL4 640 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 SH3PXD2AQ5TCZ1 1133 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 ADAT2Q7Z6V5 191 aaKnown RBP15.66■□□□□ 0.1
CALD1-206ENST00000424922 SCN4BQ8IWT1 228 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 ZDHHC14Q8IZN3 488 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 FIBCD1Q8N539 461 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 ARFGAP1Q8N6T3 406 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 ATAD1Q8NBU5 361 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 FAM149B1Q96BN6 582 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 FUBP3Q96I24 572 aaKnown RBP eCLIP15.66■□□□□ 0.1
CALD1-206ENST00000424922 CNPY3Q9BT09 278 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 LRRC19Q9H756 370 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 CHST7Q9NS84 486 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 ASNSD1Q9NWL6 643 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 INSL6Q9Y581 213 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 GBF1Q92538 1859 aa15.66■□□□□ 0.1
CALD1-206ENST00000424922 PSTPIP1O43586 416 aa15.65■□□□□ 0.1
CALD1-206ENST00000424922 FBXO21O94952 628 aa15.65■□□□□ 0.1
CALD1-206ENST00000424922 SOD2P04179 222 aa15.65■□□□□ 0.1
CALD1-206ENST00000424922 NR1D1P20393 614 aa15.65■□□□□ 0.1
CALD1-206ENST00000424922 GNGT1P63211 74 aa15.65■□□□□ 0.1
CALD1-206ENST00000424922 ATP11AP98196 1134 aa15.65■□□□□ 0.1
CALD1-206ENST00000424922 PSMD5Q16401 504 aa15.65■□□□□ 0.1
CALD1-206ENST00000424922 CDO1Q16878 200 aa15.65■□□□□ 0.1
CALD1-206ENST00000424922 CCDC137Q6PK04 289 aaKnown RBP15.65■□□□□ 0.1
CALD1-206ENST00000424922 HERC6Q8IVU3 1022 aa15.65■□□□□ 0.1
CALD1-206ENST00000424922 ARFGAP2Q8N6H7 521 aa15.65■□□□□ 0.1
CALD1-206ENST00000424922 FBXO22Q8NEZ5 403 aa15.65■□□□□ 0.1
CALD1-206ENST00000424922 UBLCP1Q8WVY7 318 aaPredicted RBP15.65■□□□□ 0.1
CALD1-206ENST00000424922 CNGB3Q9NQW8 809 aa15.65■□□□□ 0.1
CALD1-206ENST00000424922 RNF8O76064 485 aa15.65■□□□□ 0.1
CALD1-206ENST00000424922 ATP2A2P16615 1042 aaKnown RBP15.65■□□□□ 0.1
CALD1-206ENST00000424922 SDC4P31431 198 aa15.65■□□□□ 0.1
CALD1-206ENST00000424922 GPR17Q13304 367 aa15.65■□□□□ 0.1
CALD1-206ENST00000424922 ACAP1Q15027 740 aa15.65■□□□□ 0.1
CALD1-206ENST00000424922 ATP13A4Q4VNC1 1196 aa15.65■□□□□ 0.1
CALD1-206ENST00000424922 KCTD16Q68DU8 428 aa15.65■□□□□ 0.1
CALD1-206ENST00000424922 TXNRD3NBQ6F5E7 133 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms