RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 SMTNL2Q2TAL5 461 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 CCDC14Q49A88 953 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 GRASPQ7Z6J2 395 aaPredicted RBP14.07□□□□□ -0.16
PRPF39-202ENST00000424478 MIB1Q86YT6 1006 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 C2orf15Q8WU43 125 aaKnown RBP14.07□□□□□ -0.16
PRPF39-202ENST00000424478 VCPIP1Q96JH7 1222 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 TBCBQ99426 244 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 SMG9Q9H0W8 520 aaKnown RBP14.07□□□□□ -0.16
PRPF39-202ENST00000424478 TRPC7Q9HCX4 862 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 CNGB3Q9NQW8 809 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 DNAI1Q9UI46 699 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 CXCR5P32302 372 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 CREMQ03060 361 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 SLC5A9Q2M3M2 681 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 KCNT1Q5JUK3 1230 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 TMEM150AQ86TG1 271 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 MYLIPQ8WY64 445 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 AVENQ9NQS1 362 aaPredicted RBP14.07□□□□□ -0.16
PRPF39-202ENST00000424478 INTUQ9ULD6 942 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 NOTCH4Q99466 2003 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 C2orf16Q68DN1 1984 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 C2CD4BA6NLJ0 364 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 MYO1FO00160 1098 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 MYBL1P10243 752 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 COMTP21964 271 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 SP100P23497 879 aaPredicted RBP14.06□□□□□ -0.16
PRPF39-202ENST00000424478 GABRR2P28476 465 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 TAS2R40P59535 323 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 SMARCB1Q12824 385 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 CBX2Q14781 532 aaPredicted RBP14.06□□□□□ -0.16
PRPF39-202ENST00000424478 RARS2Q5T160 578 aaKnown RBP14.06□□□□□ -0.16
PRPF39-202ENST00000424478 OTUD1Q5VV17 481 aaPredicted RBP14.06□□□□□ -0.16
PRPF39-202ENST00000424478 TXNDC8Q6A555 127 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 SCYL2Q6P3W7 929 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 GAREM2Q75VX8 874 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 SLC26A9Q7LBE3 791 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 TRIM11Q96F44 468 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 VEPH1Q14D04 833 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 PM20D1Q6GTS8 502 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 AADACL2Q6P093 401 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 POTEHQ6S545 545 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 KRT35Q92764 455 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 CASP10Q92851 521 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 GPATCH2LQ9NWQ4 482 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 SMPD4Q9NXE4 827 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 DNMT3BQ9UBC3 853 aaKnown RBP14.06□□□□□ -0.16
PRPF39-202ENST00000424478 STK39Q9UEW8 545 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 ALG6Q9Y672 507 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 MTCH2Q9Y6C9 303 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 SULT1E1P49888 294 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 EFEMP1Q12805 493 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 BTBD8Q5XKL5 378 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 RSRC2Q7L4I2 434 aaKnown RBP14.06□□□□□ -0.16
PRPF39-202ENST00000424478 FAM131BQ86XD5 332 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 RHOT2Q8IXI1 618 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 LRRC57Q8N9N7 239 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 FAM172AQ8WUF8 416 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 PSMG2Q969U7 264 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 SPATA17Q96L03 361 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 ZWILCHQ9H900 591 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 MRPL47Q9HD33 250 aaKnown RBP14.06□□□□□ -0.16
PRPF39-202ENST00000424478 SCINQ9Y6U3 715 aa14.06□□□□□ -0.16
PRPF39-202ENST00000424478 MUC3AQ02505 3323 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 ANAPC1Q9H1A4 1944 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 M0QYT0 321 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 KIF5CO60282 957 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 SRGAP2O75044 1071 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 ZMYND10O75800 440 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 ATP1A1P05023 1023 aaKnown RBP14.05□□□□□ -0.16
PRPF39-202ENST00000424478 GPD1P21695 349 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 TSGA10Q9BZW7 698 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 NSUN3Q9H649 340 aaKnown RBP14.05□□□□□ -0.16
PRPF39-202ENST00000424478 POPDC2Q9HBU9 364 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 PNPLA8Q9NP80 782 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 ANLNQ9NQW6 1124 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 SCML2Q9UQR0 700 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 SNX10Q9Y5X0 201 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 RARGP13631 454 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 NYAP1Q6ZVC0 841 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 TAC4Q86UU9 113 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 ZNF707Q96C28 371 aaPredicted RBP14.05□□□□□ -0.16
PRPF39-202ENST00000424478 RNF38Q9H0F5 515 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 IL21Q9HBE4 155 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 CLDND1Q9NY35 253 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.05□□□□□ -0.16
PRPF39-202ENST00000424478 WDR35Q9P2L0 1181 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 UVRAGQ9P2Y5 699 aa14.05□□□□□ -0.16
PRPF39-202ENST00000424478 SPOPO43791 374 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 HSF2BPO75031 334 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 IL1R2P27930 398 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 SDC4P31431 198 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 NUMBP49757 651 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 EFHC1Q5JVL4 640 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 C10orf120Q5SQS8 335 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 CCDC149Q6ZUS6 474 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 TMC8Q8IU68 726 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 SLITRK1Q96PX8 696 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 PEBP4Q96S96 227 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 UBXN6Q9BZV1 441 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 ATXN3LQ9H3M9 355 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms