RNA–Protein interactions for RNA: ENST00000424254.6

FBXO28-202, Transcript of F-box protein 28, humanhuman

TSL 1 (best) BASIC

Gene FBXO28, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-202ENST00000424254 OTUB2Q96DC9 234 aa20.67■□□□□ 0.9
FBXO28-202ENST00000424254 IPO9Q96P70 1041 aaKnown RBP20.67■□□□□ 0.9
FBXO28-202ENST00000424254 ULBP1Q9BZM6 244 aa20.67■□□□□ 0.9
FBXO28-202ENST00000424254 POLR3BQ9NW08 1133 aaPredicted RBP20.67■□□□□ 0.9
FBXO28-202ENST00000424254 DNMT3LQ9UJW3 386 aa20.67■□□□□ 0.9
FBXO28-202ENST00000424254 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.67■□□□□ 0.9
FBXO28-202ENST00000424254 HELZP42694 1942 aaKnown RBP20.66■□□□□ 0.9
FBXO28-202ENST00000424254 ZBED1O96006 694 aa20.66■□□□□ 0.9
FBXO28-202ENST00000424254 ADH1CP00326 375 aa20.66■□□□□ 0.9
FBXO28-202ENST00000424254 SETSIPP0DME0 302 aa20.66■□□□□ 0.9
FBXO28-202ENST00000424254 RALAP11233 206 aa20.66■□□□□ 0.9
FBXO28-202ENST00000424254 ADH5P11766 374 aa20.66■□□□□ 0.9
FBXO28-202ENST00000424254 ERCC5P28715 1186 aaPredicted RBP20.66■□□□□ 0.9
FBXO28-202ENST00000424254 PLA2G4AP47712 749 aa20.66■□□□□ 0.9
FBXO28-202ENST00000424254 SLC6A11P48066 632 aa20.66■□□□□ 0.9
FBXO28-202ENST00000424254 NRLP54845 237 aa20.66■□□□□ 0.9
FBXO28-202ENST00000424254 MESP2Q0VG99 397 aa20.66■□□□□ 0.9
FBXO28-202ENST00000424254 TPD52L1Q16890 204 aaPredicted RBP20.66■□□□□ 0.9
FBXO28-202ENST00000424254 PM20D1Q6GTS8 502 aa20.66■□□□□ 0.9
FBXO28-202ENST00000424254 GJB7Q6PEY0 223 aa20.66■□□□□ 0.9
FBXO28-202ENST00000424254 TRIM65Q6PJ69 517 aa20.66■□□□□ 0.9
FBXO28-202ENST00000424254 HTR3DQ70Z44 454 aa20.66■□□□□ 0.9
FBXO28-202ENST00000424254 ZNF276Q8N554 614 aa20.66■□□□□ 0.9
FBXO28-202ENST00000424254 SUMF1Q8NBK3 374 aa20.66■□□□□ 0.9
FBXO28-202ENST00000424254 LRRC4Q9HBW1 653 aa20.66■□□□□ 0.9
FBXO28-202ENST00000424254 UBE2TQ9NPD8 197 aaPredicted RBP20.66■□□□□ 0.9
FBXO28-202ENST00000424254 CNTN6Q9UQ52 1028 aa20.66■□□□□ 0.9
FBXO28-202ENST00000424254 ANTXRLA6NF34 631 aa20.65■□□□□ 0.9
FBXO28-202ENST00000424254 CHURC1-FNTBB4DL54 471 aa20.65■□□□□ 0.9
FBXO28-202ENST00000424254 GABBR2O75899 941 aa20.65■□□□□ 0.9
FBXO28-202ENST00000424254 SLC9A1P19634 815 aa20.65■□□□□ 0.9
FBXO28-202ENST00000424254 MTIF2P46199 727 aaKnown RBP20.65■□□□□ 0.9
FBXO28-202ENST00000424254 FNTBP49356 437 aa20.65■□□□□ 0.9
FBXO28-202ENST00000424254 YWHAGP61981 247 aaKnown RBP eCLIP20.65■□□□□ 0.9
FBXO28-202ENST00000424254 APBA1Q02410 837 aa20.65■□□□□ 0.9
FBXO28-202ENST00000424254 ADIGQ0VDE8 80 aa20.65■□□□□ 0.9
FBXO28-202ENST00000424254 CNGA2Q16280 664 aa20.65■□□□□ 0.9
FBXO28-202ENST00000424254 TADA2BQ86TJ2 420 aa20.65■□□□□ 0.9
FBXO28-202ENST00000424254 MIB1Q86YT6 1006 aa20.65■□□□□ 0.9
FBXO28-202ENST00000424254 ARHGAP18Q8N392 663 aa20.65■□□□□ 0.9
FBXO28-202ENST00000424254 RPLP0P6Q8NHW5 317 aa20.65■□□□□ 0.9
FBXO28-202ENST00000424254 THAP9Q9H5L6 903 aa20.65■□□□□ 0.9
FBXO28-202ENST00000424254 M0QYV0 167 aa20.64■□□□□ 0.89
FBXO28-202ENST00000424254 GOLGA8FQ08AF8 430 aa20.64■□□□□ 0.89
FBXO28-202ENST00000424254 GOLGA8DPQ0D2H9 430 aa20.64■□□□□ 0.89
FBXO28-202ENST00000424254 HEATR6Q6AI08 1181 aaKnown RBP20.64■□□□□ 0.89
FBXO28-202ENST00000424254 PMF1Q6P1K2 205 aa20.64■□□□□ 0.89
FBXO28-202ENST00000424254 TMEM25Q86YD3 366 aa20.64■□□□□ 0.89
FBXO28-202ENST00000424254 SFTPA1Q8IWL2 248 aa20.64■□□□□ 0.89
FBXO28-202ENST00000424254 SLC35F5Q8WV83 523 aa20.64■□□□□ 0.89
FBXO28-202ENST00000424254 KCTD13Q8WZ19 329 aa20.64■□□□□ 0.89
FBXO28-202ENST00000424254 SECISBP2LQ93073 1101 aaKnown RBP20.64■□□□□ 0.89
FBXO28-202ENST00000424254 CDK5RAP1Q96SZ6 601 aaKnown RBP20.64■□□□□ 0.89
FBXO28-202ENST00000424254 EPC1Q9H2F5 836 aa20.64■□□□□ 0.89
FBXO28-202ENST00000424254 SPHK2Q9NRA0 654 aa20.64■□□□□ 0.89
FBXO28-202ENST00000424254 DACH1Q9UI36 760 aa20.64■□□□□ 0.89
FBXO28-202ENST00000424254 RASAL2Q9UJF2 1139 aa20.64■□□□□ 0.89
FBXO28-202ENST00000424254 K7EQS6 105 aa20.63■□□□□ 0.89
FBXO28-202ENST00000424254 HOXC11O43248 304 aaPredicted RBP20.63■□□□□ 0.89
FBXO28-202ENST00000424254 ATG13O75143 517 aa20.63■□□□□ 0.89
FBXO28-202ENST00000424254 STC2O76061 302 aa20.63■□□□□ 0.89
FBXO28-202ENST00000424254 KRT5P13647 590 aa20.63■□□□□ 0.89
FBXO28-202ENST00000424254 HOXA6P31267 233 aa20.63■□□□□ 0.89
FBXO28-202ENST00000424254 EIF2DP41214 584 aaKnown RBP20.63■□□□□ 0.89
FBXO28-202ENST00000424254 RGS7P49802 495 aa20.63■□□□□ 0.89
FBXO28-202ENST00000424254 GAD2Q05329 585 aa20.63■□□□□ 0.89
FBXO28-202ENST00000424254 EFEMP1Q12805 493 aa20.63■□□□□ 0.89
FBXO28-202ENST00000424254 STILQ15468 1287 aa20.63■□□□□ 0.89
FBXO28-202ENST00000424254 HSP90AA4PQ58FG1 418 aa20.63■□□□□ 0.89
FBXO28-202ENST00000424254 GBP6Q6ZN66 633 aa20.63■□□□□ 0.89
FBXO28-202ENST00000424254 Q6ZNB5 142 aa20.63■□□□□ 0.89
FBXO28-202ENST00000424254 ETFBKMTQ8IXQ9 262 aa20.63■□□□□ 0.89
FBXO28-202ENST00000424254 SIX6OS1Q8N1H7 587 aa20.63■□□□□ 0.89
FBXO28-202ENST00000424254 LSM7Q9UK45 103 aaKnown RBP20.63■□□□□ 0.89
FBXO28-202ENST00000424254 LCP1P13796 627 aa20.62■□□□□ 0.89
FBXO28-202ENST00000424254 SEC13P55735 322 aa20.62■□□□□ 0.89
FBXO28-202ENST00000424254 MAN2A1Q16706 1144 aa20.62■□□□□ 0.89
FBXO28-202ENST00000424254 EXOC3L4Q17RC7 722 aa20.62■□□□□ 0.89
FBXO28-202ENST00000424254 RSRC2Q7L4I2 434 aaKnown RBP20.62■□□□□ 0.89
FBXO28-202ENST00000424254 ENOSF1Q7L5Y1 443 aa20.62■□□□□ 0.89
FBXO28-202ENST00000424254 PHTF2Q8N3S3 785 aa20.62■□□□□ 0.89
FBXO28-202ENST00000424254 NAT16Q8N8M0 369 aa20.62■□□□□ 0.89
FBXO28-202ENST00000424254 PNKPQ96T60 521 aa20.62■□□□□ 0.89
FBXO28-202ENST00000424254 GTPBP10A4D1E9 387 aaKnown RBP20.61■□□□□ 0.89
FBXO28-202ENST00000424254 YJEFN3A6XGL0 299 aa20.61■□□□□ 0.89
FBXO28-202ENST00000424254 E7ENQ6 273 aa20.61■□□□□ 0.89
FBXO28-202ENST00000424254 PIK3R2O00459 728 aa20.61■□□□□ 0.89
FBXO28-202ENST00000424254 KAT7O95251 611 aa20.61■□□□□ 0.89
FBXO28-202ENST00000424254 KLKB1P03952 638 aa20.61■□□□□ 0.89
FBXO28-202ENST00000424254 HMBSP08397 361 aa20.61■□□□□ 0.89
FBXO28-202ENST00000424254 PON1P27169 355 aa20.61■□□□□ 0.89
FBXO28-202ENST00000424254 PXNP49023 591 aaPredicted RBP20.61■□□□□ 0.89
FBXO28-202ENST00000424254 MFAP3P55082 362 aa20.61■□□□□ 0.89
FBXO28-202ENST00000424254 KDSRQ06136 332 aa20.61■□□□□ 0.89
FBXO28-202ENST00000424254 SRSF5Q13243 272 aaKnown RBP20.61■□□□□ 0.89
FBXO28-202ENST00000424254 ANO4Q32M45 955 aa20.61■□□□□ 0.89
FBXO28-202ENST00000424254 MIIPQ5JXC2 388 aa20.61■□□□□ 0.89
FBXO28-202ENST00000424254 RBM43Q6ZSC3 357 aaKnown RBP20.61■□□□□ 0.89
FBXO28-202ENST00000424254 LONP2Q86WA8 852 aa20.61■□□□□ 0.89
FBXO28-202ENST00000424254 FAM114A1Q8IWE2 563 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms