RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	KDELR1	P24390	212 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	KLRC2	P26717	231 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	GNL1	P36915	607 aa	Predicted RBP	10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	RPL34	P49207	117 aa	Known RBP	10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	VCP	P55072	806 aa	Known RBP	10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	SLC8A3	P57103	927 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	ZNF200	P98182	395 aa	Predicted RBP	10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	SLC6A3	Q01959	620 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	SMAD4	Q13485	552 aa	Known RBP	10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	SNX1	Q13596	522 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	TFDP2	Q14188	446 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	HIC1	Q14526	733 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	PDK2	Q15119	407 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	GOLGA7B	Q2TAP0	167 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	FAM102A	Q5T9C2	384 aa	Predicted RBP	10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	GSTA5	Q7RTV2	222 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	BMP8A	Q7Z5Y6	402 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	PCGF5	Q86SE9	256 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	RNF135	Q8IUD6	432 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	ANKRD52	Q8NB46	1076 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	APPL2	Q8NEU8	664 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	OR6B3	Q8NGW1	331 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	JOSD2	Q8TAC2	188 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	SLC35F5	Q8WV83	523 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	TEKT4	Q8WW24	435 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	EDA	Q92838	391 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	ATOH1	Q92858	354 aa	Predicted RBP	10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	WNT8B	Q93098	351 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	CCDC114	Q96M63	670 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	MRPL45	Q9BRJ2	306 aa	Known RBP	10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	PHACTR1	Q9C0D0	580 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	NXF3	Q9H4D5	531 aa	Known RBP	10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	CNOT10	Q9H9A5	744 aa	Known RBP	10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	PRDM16	Q9HAZ2	1276 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	METTL5	Q9NRN9	209 aa	Known RBP	10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	TUBGCP4	Q9UGJ1	667 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	R3HDM2	Q9Y2K5	976 aa	Known RBP	10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	IPP	Q9Y573	584 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	KAT6A	Q92794	2004 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	C5orf67	F2Z3F1	127 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	RIPK2	O43353	540 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	TCEA3	O75764	348 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	ENDOD1	O94919	500 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	GJB6	O95452	261 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	PDGFRA	P16234	1089 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	GJC1	P36383	396 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	PTPN9	P43378	593 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	RAB27A	P51159	221 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	IRAK1	P51617	712 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	BCAT1	P54687	386 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	BST2	Q10589	180 aa	Known RBP	10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	SOWAHA	Q2M3V2	549 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	KRT71	Q3SY84	523 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	TWF2	Q6IBS0	349 aa	Known RBP	10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	OR6B2	Q6IFH4	312 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	FAM43B	Q6ZT52	329 aa	Predicted RBP	10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	ALLC	Q8N6M5	410 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	KCTD6	Q8NC69	237 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	SMG8	Q8ND04	991 aa	Known RBP	10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	SLC35B2	Q8TB61	432 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	UBA3	Q8TBC4	463 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	SPATA18	Q8TC71	538 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	TMEM40	Q8WWA1	233 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	ATG4A	Q8WYN0	398 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	RAPGEF5	Q92565	580 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	C18orf25	Q96B23	403 aa	Predicted RBP	10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	HERPUD2	Q9BSE4	406 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	IRF2BPL	Q9H1B7	796 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	PCDH9	Q9HC56	1237 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	CALCOCO1	Q9P1Z2	691 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	CD207	Q9UJ71	328 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	USP18	Q9UMW8	372 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	ZNF148	Q9UQR1	794 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	SQOR	Q9Y6N5	450 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	USP34	Q70CQ2	3546 aa		10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	10.48	□□□□□ -0.73
POLR1A-204	ENST00000424089	ANK1	P16157	1881 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	TMEM221	A6NGB7	291 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089		E5RJQ4	531 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	APOC4-APOC2	K7ER74	178 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089		M0R296	226 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	PRPSAP2	O60256	369 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	ZNF623	O75123	536 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	AGT	P01019	485 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	APOC2	P02655	101 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	CTSH	P09668	335 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	SKI	P12755	728 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	AKAP5	P24588	427 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	ATP5D	P30049	168 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	MIP	P30301	263 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	SDC4	P31431	198 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	STIP1	P31948	543 aa	Known RBP	10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	RPL9	P32969	192 aa	Known RBP	10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	BMPR1A	P36894	532 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	LTBR	P36941	435 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	NDUFV1	P49821	464 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	ITGA8	P53708	1063 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	HYAL1	Q12794	435 aa		10.47	□□□□□ -0.73
POLR1A-204	ENST00000424089	TCF15	Q12870	199 aa		10.47	□□□□□ -0.73

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