RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 CD46P15529 392 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 NCF2P19878 526 aaPredicted RBP7.09□□□□□ -1.28
CNOT4-205ENST00000423368 HSPA1LP34931 641 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 IDUAP35475 653 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 HPCAL1P37235 193 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 ITGA8P53708 1063 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 PKNOX1P55347 436 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 SNAPC2Q13487 334 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 CCNIQ14094 377 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 ADRM1Q16186 407 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 RTN1Q16799 776 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 ASTE1Q2TB18 679 aaPredicted RBP7.09□□□□□ -1.28
CNOT4-205ENST00000423368 CCBE1Q6UXH8 406 aaPredicted RBP7.09□□□□□ -1.28
CNOT4-205ENST00000423368 ZCCHC23Q6ZST2 131 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 PASD1Q8IV76 773 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 GLYCTKQ8IVS8 523 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 ZDHHC14Q8IZN3 488 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 CACTIN-AS1Q8N1I8 211 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 FBXL16Q8N461 479 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 ZNF366Q8N895 744 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 FAM47BQ8NA70 645 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 FLAD1Q8NFF5 587 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 DDI1Q8WTU0 396 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 HES6Q96HZ4 224 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 FAM111AQ96PZ2 611 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 DHRS9Q9BPW9 319 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 TDRD1Q9BXT4 1180 aaKnown RBP7.09□□□□□ -1.28
CNOT4-205ENST00000423368 EPB41L1Q9H4G0 881 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 MANSC1Q9H8J5 431 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 MAP3K20Q9NYL2 800 aaKnown RBP7.09□□□□□ -1.28
CNOT4-205ENST00000423368 EPS15L1Q9UBC2 864 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 KCNN3Q9UGI6 736 aa7.09□□□□□ -1.28
CNOT4-205ENST00000423368 ZNF335Q9H4Z2 1342 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-205ENST00000423368 RAB19A4D1S5 217 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 I3L4J1 428 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 PIK3CDO00329 1044 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 DYNC1LI2O43237 492 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-205ENST00000423368 CCNKO75909 580 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 TTC4O95801 387 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 PRKCBP05771 671 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 H2AFZP0C0S5 128 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 KRT3P12035 628 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 MYCLP12524 364 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-205ENST00000423368 VEGFAP15692 232 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-205ENST00000423368 CFL1P23528 166 aaKnown RBP7.08□□□□□ -1.28
CNOT4-205ENST00000423368 RXRBP28702 533 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 HTR2BP41595 481 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 MLLT10P55197 1068 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 GPLD1P80108 840 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 BAATQ14032 418 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-205ENST00000423368 ZNF267Q14586 743 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-205ENST00000423368 GRM7Q14831 915 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 FASTKD3Q14CZ7 662 aaKnown RBP7.08□□□□□ -1.28
CNOT4-205ENST00000423368 NPTX1Q15818 432 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 IL17AQ16552 155 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 ABCB5Q2M3G0 1257 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 BTBD8Q5XKL5 378 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 H2AFVQ71UI9 128 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 METTL23Q86XA0 190 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 PRELID2Q8N945 189 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 TCP10LQ8TDR4 215 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 GIMAP1Q8WWP7 306 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 ZNF594Q96JF6 807 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-205ENST00000423368 ZNF668Q96K58 619 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-205ENST00000423368 CFAP57Q96MR6 1250 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 RUNDC3BQ96NL0 473 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 MTMR9Q96QG7 549 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 ERGIC2Q96RQ1 377 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 SPOCK3Q9BQ16 436 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 SEMA6BQ9H3T3 888 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 POLR1BQ9H9Y6 1135 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 PAQR5Q9NXK6 330 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-205ENST00000423368 IGSF9Q9P2J2 1179 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 SOX13Q9UN79 622 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 AP4E1Q9UPM8 1137 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 GJA3Q9Y6H8 435 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 ATP7BP35670 1465 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 TROQ12816 1431 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-205ENST00000423368 H0Y858 1186 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 TSC22D2O75157 780 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 NPPAP01160 153 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 SLC9A1P19634 815 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 CCNE1P24864 410 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 UQCRC1P31930 480 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 SERPINB5P36952 375 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 OPRL1P41146 370 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 AQP5P55064 265 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 CDK16Q00536 496 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 POU5F1Q01860 360 aaKnown RBP7.08□□□□□ -1.28
CNOT4-205ENST00000423368 KRT17Q04695 432 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 CDK18Q07002 472 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 HNRNPDQ14103 355 aaKnown RBP7.08□□□□□ -1.28
CNOT4-205ENST00000423368 NTRK3Q16288 839 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 NFE2Q16621 373 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-205ENST00000423368 PDK4Q16654 411 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 DCAF17Q5H9S7 520 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-205ENST00000423368 SPDYCQ5MJ68 293 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 DCLRE1AQ6PJP8 1040 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 BTNL9Q6UXG8 535 aa7.08□□□□□ -1.28
CNOT4-205ENST00000423368 TMEM92Q6UXU6 159 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms