RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 PPM1KQ8N3J5 372 aa16.28■□□□□ 0.2
SPC24-201ENST00000423327 NDRG1Q92597 394 aaKnown RBP16.28■□□□□ 0.2
SPC24-201ENST00000423327 UBXN6Q9BZV1 441 aa16.28■□□□□ 0.2
SPC24-201ENST00000423327 TBC1D14Q9P2M4 693 aa16.28■□□□□ 0.2
SPC24-201ENST00000423327 NAGPAQ9UK23 515 aa16.28■□□□□ 0.2
SPC24-201ENST00000423327 SH3BP1Q9Y3L3 701 aa16.28■□□□□ 0.2
SPC24-201ENST00000423327 CEP250Q9BV73 2442 aa16.28■□□□□ 0.2
SPC24-201ENST00000423327 MYO18AQ92614 2054 aaKnown RBP16.27■□□□□ 0.2
SPC24-201ENST00000423327 XPO1O14980 1071 aaKnown RBP16.27■□□□□ 0.2
SPC24-201ENST00000423327 HOXC11O43248 304 aaPredicted RBP16.27■□□□□ 0.2
SPC24-201ENST00000423327 GNA14O95837 355 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 AFPP02771 609 aaKnown RBP16.27■□□□□ 0.2
SPC24-201ENST00000423327 CD19P15391 556 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 ATP5C1P36542 298 aaKnown RBP16.27■□□□□ 0.2
SPC24-201ENST00000423327 ANP32AP39687 249 aaKnown RBP16.27■□□□□ 0.2
SPC24-201ENST00000423327 ZNF132P52740 706 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 BCAT1P54687 386 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 YWHAEP62258 255 aaKnown RBP16.27■□□□□ 0.2
SPC24-201ENST00000423327 BST2Q10589 180 aaKnown RBP16.27■□□□□ 0.2
SPC24-201ENST00000423327 LPAL2Q16609 132 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 Q6ZNB5 142 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 WDR5BQ86VZ2 330 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 LONP2Q86WA8 852 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 TMEM25Q86YD3 366 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 ZNF276Q8N554 614 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 EHBP1Q8NDI1 1231 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 UBA3Q8TBC4 463 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 USP33Q8TEY7 942 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 RUBCNQ92622 972 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 OTUB2Q96DC9 234 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 CNOT6LQ96LI5 555 aaKnown RBP16.27■□□□□ 0.2
SPC24-201ENST00000423327 HHIPQ96QV1 700 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 ULBP1Q9BZM6 244 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 NACA2Q9H009 215 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 INTS2Q9H0H0 1204 aaKnown RBP16.27■□□□□ 0.2
SPC24-201ENST00000423327 CLIC5Q9NZA1 410 aa16.27■□□□□ 0.2
SPC24-201ENST00000423327 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.27■□□□□ 0.2
SPC24-201ENST00000423327 SPAG17Q6Q759 2223 aa16.27■□□□□ 0.19
SPC24-201ENST00000423327 TRIM24O15164 1050 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 STC2O76061 302 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 ADH1CP00326 375 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 PAEPP09466 180 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 VDRP11473 427 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 BRD2P25440 801 aaKnown RBP16.26■□□□□ 0.19
SPC24-201ENST00000423327 EIF2DP41214 584 aaKnown RBP16.26■□□□□ 0.19
SPC24-201ENST00000423327 PLA2G4AP47712 749 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 TKTL1P51854 596 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 SEC13P55735 322 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 GCNT1Q02742 428 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 KDSRQ06136 332 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 DPCR1Q3MIW9 517 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 C10orf120Q5SQS8 335 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 PM20D1Q6GTS8 502 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 LCLAT1Q6UWP7 414 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 RBBP8NLQ8NC74 664 aaPredicted RBP16.26■□□□□ 0.19
SPC24-201ENST00000423327 DNAI2Q9GZS0 605 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 SPHK2Q9NRA0 654 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 LMBRD1Q9NUN5 540 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.26■□□□□ 0.19
SPC24-201ENST00000423327 PCDHB4Q9Y5E5 795 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 SDK1Q7Z5N4 2213 aa16.26■□□□□ 0.19
SPC24-201ENST00000423327 KLKB1P03952 638 aa16.25■□□□□ 0.19
SPC24-201ENST00000423327 HNRNPLP14866 589 aaKnown RBP eCLIP16.25■□□□□ 0.19
SPC24-201ENST00000423327 TGM1P22735 817 aa16.25■□□□□ 0.19
SPC24-201ENST00000423327 APBA1Q02410 837 aa16.25■□□□□ 0.19
SPC24-201ENST00000423327 ADIGQ0VDE8 80 aa16.25■□□□□ 0.19
SPC24-201ENST00000423327 DMC1Q14565 340 aa16.25■□□□□ 0.19
SPC24-201ENST00000423327 GJB7Q6PEY0 223 aa16.25■□□□□ 0.19
SPC24-201ENST00000423327 SYT13Q7L8C5 426 aa16.25■□□□□ 0.19
SPC24-201ENST00000423327 MIB1Q86YT6 1006 aa16.25■□□□□ 0.19
SPC24-201ENST00000423327 NAT16Q8N8M0 369 aa16.25■□□□□ 0.19
SPC24-201ENST00000423327 ZDHHC4Q9NPG8 344 aa16.25■□□□□ 0.19
SPC24-201ENST00000423327 DNMT3LQ9UJW3 386 aa16.25■□□□□ 0.19
SPC24-201ENST00000423327 HCN2Q9UL51 889 aa16.25■□□□□ 0.19
SPC24-201ENST00000423327 CNTN6Q9UQ52 1028 aa16.25■□□□□ 0.19
SPC24-201ENST00000423327 A0A0A0MRY4 1105 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 ATG13O75143 517 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 TULP3O75386 442 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 KAT7O95251 611 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 ZBED1O96006 694 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 CCDC192P0DO97 292 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 KIR2DL1P43626 348 aaPredicted RBP16.24■□□□□ 0.19
SPC24-201ENST00000423327 PSEN1P49768 467 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 YWHAGP61981 247 aaKnown RBP eCLIP16.24■□□□□ 0.19
SPC24-201ENST00000423327 GAD2Q05329 585 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 EFEMP1Q12805 493 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 C2orf27AQ580R0 203 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 EMC10Q5UCC4 262 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 PMF1Q6P1K2 205 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 KIAA2013Q8IYS2 634 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 SLC35F5Q8WV83 523 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 KCTD13Q8WZ19 329 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 SECISBP2LQ93073 1101 aaKnown RBP16.24■□□□□ 0.19
SPC24-201ENST00000423327 EXOC4Q96A65 974 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 PNKPQ96T60 521 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 CRACR2AQ9BSW2 395 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 PARD6AQ9NPB6 346 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 HESX1Q9UBX0 185 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 RASAL2Q9UJF2 1139 aa16.24■□□□□ 0.19
SPC24-201ENST00000423327 SLC8A2Q9UPR5 921 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms