RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 OXNAD1Q96HP4 312 aaPredicted RBP16.42■□□□□ 0.22
CDH1-202ENST00000422392 POPDC2Q9HBU9 364 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 SLC24A3Q9HC58 644 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 TNFSF13BQ9Y275 285 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 A0A087WZ62 844 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 FCHO1O14526 889 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 CHADO15335 359 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 ZBED1O96006 694 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 HSF5Q4G112 596 aaPredicted RBP16.41■□□□□ 0.22
CDH1-202ENST00000422392 GJC2Q5T442 439 aaPredicted RBP16.41■□□□□ 0.22
CDH1-202ENST00000422392 TTC39BQ5VTQ0 682 aaPredicted RBP16.41■□□□□ 0.22
CDH1-202ENST00000422392 APOBEC3FQ8IUX4 373 aaKnown RBP16.41■□□□□ 0.22
CDH1-202ENST00000422392 PCDH19Q8TAB3 1148 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 DTX3LQ8TDB6 740 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 MCUR1Q96AQ8 359 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 FDXACB1Q9BRP7 624 aaPredicted RBP16.41■□□□□ 0.22
CDH1-202ENST00000422392 OSBPL1AQ9BXW6 950 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 CXCL16Q9H2A7 254 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 PDGFCQ9NRA1 345 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 SMAPO00193 183 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 USP2O75604 605 aaPredicted RBP16.41■□□□□ 0.22
CDH1-202ENST00000422392 IL18RAPO95256 599 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 PFKMP08237 780 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 CSH1P0DML2 217 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 CSH2P0DML3 217 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 VDRP11473 427 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 ESRRAP11474 423 aaPredicted RBP16.41■□□□□ 0.22
CDH1-202ENST00000422392 GRIA1P42261 906 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 ATXN1P54253 815 aaKnown RBP16.41■□□□□ 0.22
CDH1-202ENST00000422392 BCAR1P56945 870 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 BST1Q10588 318 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 BLMHQ13867 455 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 TFDP2Q14188 446 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 RCN1Q15293 331 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 SMAD1Q15797 465 aaKnown RBP16.41■□□□□ 0.22
CDH1-202ENST00000422392 SLC10A6Q3KNW5 377 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 ANO7Q6IWH7 933 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 SCUBE3Q8IX30 993 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 FAM172AQ8WUF8 416 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 FGD4Q96M96 766 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 LPIN3Q9BQK8 851 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 B3GNT5Q9BYG0 378 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 DCLRE1BQ9H816 532 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 ETNK2Q9NVF9 386 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 MTO1Q9Y2Z2 717 aaKnown RBP16.41■□□□□ 0.22
CDH1-202ENST00000422392 MAD1L1Q9Y6D9 718 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 BPTFQ12830 3046 aa16.41■□□□□ 0.22
CDH1-202ENST00000422392 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.4■□□□□ 0.22
CDH1-202ENST00000422392 LGR5O75473 907 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 IRX4P78413 519 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 TMPRSS15P98073 1019 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 ACAP1Q15027 740 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 MROH9Q5TGP6 573 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 PMF1Q6P1K2 205 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 ARID3BQ8IVW6 561 aaPredicted RBP16.4■□□□□ 0.22
CDH1-202ENST00000422392 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.4■□□□□ 0.22
CDH1-202ENST00000422392 VPS52Q8N1B4 723 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 ACAP3Q96P50 834 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 C20orf27Q9GZN8 174 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 FAM49BQ9NUQ9 324 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 PCMTD2Q9NV79 361 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 PAK5Q9P286 719 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 GAS2O43903 313 aaKnown RBP16.4■□□□□ 0.22
CDH1-202ENST00000422392 RFPL1O75677 317 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 VTNP04004 478 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 TSHRP16473 764 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 OSBPP22059 807 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 SH3D19Q5HYK7 790 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 PPP1R26Q5T8A7 1209 aaPredicted RBP16.4■□□□□ 0.22
CDH1-202ENST00000422392 WDR78Q5VTH9 848 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 CAPRIN2Q6IMN6 1127 aaKnown RBP16.4■□□□□ 0.22
CDH1-202ENST00000422392 ZCCHC23Q6ZST2 131 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 ILDR2Q71H61 639 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 TREML1Q86YW5 311 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 NETO2Q8NC67 525 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 NRG4Q8WWG1 115 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 SNRNP25Q9BV90 132 aaKnown RBP16.4■□□□□ 0.22
CDH1-202ENST00000422392 PCDH18Q9HCL0 1135 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 ARHGEF4Q9NR80 690 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 RNF19AQ9NV58 838 aa16.4■□□□□ 0.22
CDH1-202ENST00000422392 SLC15A5A6NIM6 579 aa16.39■□□□□ 0.22
CDH1-202ENST00000422392 FZD9O00144 591 aa16.39■□□□□ 0.22
CDH1-202ENST00000422392 APOL1O14791 398 aa16.39■□□□□ 0.22
CDH1-202ENST00000422392 METTL18O95568 372 aa16.39■□□□□ 0.22
CDH1-202ENST00000422392 SNRPAP09012 282 aaKnown RBP16.39■□□□□ 0.22
CDH1-202ENST00000422392 CHI3L2Q15782 390 aa16.39■□□□□ 0.22
CDH1-202ENST00000422392 CCDC6Q16204 474 aa16.39■□□□□ 0.22
CDH1-202ENST00000422392 GOLGA7BQ2TAP0 167 aa16.39■□□□□ 0.22
CDH1-202ENST00000422392 FAM47CQ5HY64 1035 aa16.39■□□□□ 0.22
CDH1-202ENST00000422392 CCDC62Q6P9F0 684 aa16.39■□□□□ 0.22
CDH1-202ENST00000422392 UNC5AQ6ZN44 842 aa16.39■□□□□ 0.22
CDH1-202ENST00000422392 UNC5BQ8IZJ1 945 aa16.39■□□□□ 0.22
CDH1-202ENST00000422392 FBXO41Q8TF61 875 aa16.39■□□□□ 0.22
CDH1-202ENST00000422392 MIS12Q9H081 205 aa16.39■□□□□ 0.22
CDH1-202ENST00000422392 PDZD7Q9H5P4 517 aa16.39■□□□□ 0.22
CDH1-202ENST00000422392 PIH1D1Q9NWS0 290 aaKnown RBP16.39■□□□□ 0.22
CDH1-202ENST00000422392 NMRK1Q9NWW6 199 aa16.39■□□□□ 0.22
CDH1-202ENST00000422392 SLC17A6Q9P2U8 582 aa16.39■□□□□ 0.22
CDH1-202ENST00000422392 PLLPQ9Y342 182 aa16.39■□□□□ 0.22
CDH1-202ENST00000422392 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.39■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms