RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 ZFP69BQ9UJL9 534 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 KIF13BQ9NQT8 1826 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 SCN1AP35498 2009 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 ENTPD5O75356 428 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 ABCD1P33897 745 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 ZNF143P52747 638 aaPredicted RBP13.87□□□□□ -0.19
MCF2L-213ENST00000421756 NR1H3Q13133 447 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 MAP7D3Q8IWC1 876 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 PDCD7Q8N8D1 485 aaKnown RBP13.87□□□□□ -0.19
MCF2L-213ENST00000421756 ANKLE1Q8NAG6 615 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 USP33Q8TEY7 942 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 NSMCE1Q8WV22 266 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 TMEM40Q8WWA1 233 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 EDEM1Q92611 657 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 LPPQ93052 612 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 TTC25Q96NG3 672 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 RNF157Q96PX1 679 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 SNX25Q9H3E2 840 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 RSAD1Q9HA92 442 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 GJD2Q9UKL4 321 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 PCDHGC3Q9UN70 934 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 SHOC2Q9UQ13 582 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 SPDYE5A6NIY4 337 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 C2CD4BA6NLJ0 364 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 COPEO14579 308 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 SERPINB3P29508 390 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 ALDH3A1P30838 453 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 KDSRQ06136 332 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 LONP2Q86WA8 852 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 AGGF1Q8N302 714 aaeCLIP13.87□□□□□ -0.194e-7■■■□□ 14.7
MCF2L-213ENST00000421756 CCHCR1Q8TD31 782 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 RHOBTB2Q9BYZ6 727 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 NUMBLQ9Y6R0 609 aa13.87□□□□□ -0.19
MCF2L-213ENST00000421756 BTBD19C9JJ37 291 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 CAPN9O14815 690 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 IL18RAPO95256 599 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 ANP32DO95626 131 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 GNL1P36915 607 aaPredicted RBP13.86□□□□□ -0.19
MCF2L-213ENST00000421756 ADIGQ0VDE8 80 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 ZNF268Q14587 947 aaPredicted RBP13.86□□□□□ -0.19
MCF2L-213ENST00000421756 TNFAIP8L3Q5GJ75 292 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 NOL9Q5SY16 702 aaKnown RBP13.86□□□□□ -0.19
MCF2L-213ENST00000421756 FYB2Q5VWT5 728 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 TTC8Q8TAM2 541 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 CYTH2Q99418 400 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 MANSC1Q9H8J5 431 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 SLC12A4Q9UP95 1085 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 IGKV6-21A0A0C4DH24 114 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 SPTLC1O15269 473 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 TREHO43280 583 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 YBX3P16989 372 aaKnown RBP eCLIP13.86□□□□□ -0.19
MCF2L-213ENST00000421756 CLNS1AP54105 237 aaKnown RBP13.86□□□□□ -0.19
MCF2L-213ENST00000421756 MXRA7P84157 204 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 SLC10A2Q12908 348 aaPredicted RBP13.86□□□□□ -0.19
MCF2L-213ENST00000421756 XRCC4Q13426 336 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 LAMC2Q13753 1193 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 TAPT1Q6NXT6 567 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 ARID3BQ8IVW6 561 aaPredicted RBP13.86□□□□□ -0.19
MCF2L-213ENST00000421756 TTC13Q8NBP0 860 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 HIPK4Q8NE63 616 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 RXFP1Q9HBX9 757 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 PCDH18Q9HCL0 1135 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 ZNF646O15015 1829 aaPredicted RBP13.86□□□□□ -0.19
MCF2L-213ENST00000421756 WDR27A2RRH5 827 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 ASB14A6NK59 587 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 PFKMP08237 780 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 TPH1P17752 444 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 SNAPC2Q13487 334 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 GPR162Q16538 588 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 ANKRD20A3Q5VUR7 823 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 POLNQ7Z5Q5 900 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 NDUFAF2Q8N183 169 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 PNPLA1Q8N8W4 532 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 TBCBQ99426 244 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 NCAPGQ9BPX3 1015 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 TSSK1BQ9BXA7 367 aa13.86□□□□□ -0.19
MCF2L-213ENST00000421756 DRG1Q9Y295 367 aaKnown RBP13.86□□□□□ -0.19
MCF2L-213ENST00000421756 ATP9BO43861 1147 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 GABBR2O75899 941 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 BEST1O76090 585 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 PROZP22891 400 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 MAP3K7CLP57077 242 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 TAP1Q03518 808 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 CCL14Q16627 93 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 ALYREFQ86V81 257 aaKnown RBP13.85□□□□□ -0.19
MCF2L-213ENST00000421756 C16orf70Q9BSU1 422 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 SIK2Q9H0K1 926 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 AP4E1Q9UPM8 1137 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 INPP5FQ9Y2H2 1132 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 NUP205Q92621 2012 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 SNAI1O95863 264 aaPredicted RBP13.85□□□□□ -0.19
MCF2L-213ENST00000421756 MLH1P40692 756 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 HDAC4P56524 1084 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 TNFAIP2Q03169 654 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 CACNB2Q08289 660 aaPredicted RBP13.85□□□□□ -0.19
MCF2L-213ENST00000421756 LRRC38Q5VT99 294 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 FASTKD5Q7L8L6 764 aaKnown RBP13.85□□□□□ -0.19
MCF2L-213ENST00000421756 DEFB106AQ8N104 65 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 EFCAB3Q8N7B9 438 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 RNF34Q969K3 372 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms