RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 RSPO2Q6UXX9 243 aaPredicted RBP13.46□□□□□ -0.25
LINC00642-201ENST00000419459 APLFQ8IW19 511 aaPredicted RBP13.46□□□□□ -0.25
LINC00642-201ENST00000419459 TMEM86AQ8N2M4 240 aa13.46□□□□□ -0.25
LINC00642-201ENST00000419459 KLHL23Q8NBE8 558 aa13.46□□□□□ -0.25
LINC00642-201ENST00000419459 MDM1Q8TC05 714 aa13.46□□□□□ -0.25
LINC00642-201ENST00000419459 SP7Q8TDD2 431 aaPredicted RBP13.46□□□□□ -0.25
LINC00642-201ENST00000419459 PCDHB18PQ96TA0 734 aa13.46□□□□□ -0.25
LINC00642-201ENST00000419459 PBX4Q9BYU1 374 aa13.46□□□□□ -0.25
LINC00642-201ENST00000419459 RHOBTB2Q9BYZ6 727 aa13.46□□□□□ -0.25
LINC00642-201ENST00000419459 CARD9Q9H257 536 aa13.46□□□□□ -0.25
LINC00642-201ENST00000419459 CRTAC1Q9NQ79 661 aa13.46□□□□□ -0.25
LINC00642-201ENST00000419459 YBX2Q9Y2T7 364 aaKnown RBP13.46□□□□□ -0.25
LINC00642-201ENST00000419459 WFS1O76024 890 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 CTNNB1P35222 781 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 GCKP35557 465 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 DR1Q01658 176 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 TNFAIP8L3Q5GJ75 292 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 MDH1BQ5I0G3 518 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 CHRDL2Q6WN34 429 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 TBC1D1Q86TI0 1168 aaPredicted RBP13.46□□□□□ -0.26
LINC00642-201ENST00000419459 LRRTM3Q86VH5 581 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 LRRC34Q8IZ02 419 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 SLC30A5Q8TAD4 765 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 AGAP11Q8TF27 550 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 AGPAT1Q99943 283 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 SH3GL3Q99963 347 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 SELENOSQ9BQE4 189 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 SYT15Q9BQS2 421 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 EPB41L4BQ9H329 900 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 TSPAN16Q9UKR8 245 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 PCDHB8Q9UN66 801 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 PCDHB12Q9Y5F1 795 aa13.46□□□□□ -0.26
LINC00642-201ENST00000419459 NCANO14594 1321 aa13.45□□□□□ -0.26
LINC00642-201ENST00000419459 PTPRDP23468 1912 aa13.45□□□□□ -0.26
LINC00642-201ENST00000419459 SNX3O60493 162 aa13.45□□□□□ -0.26
LINC00642-201ENST00000419459 SMNDC1O75940 238 aaKnown RBP eCLIP13.45□□□□□ -0.26
LINC00642-201ENST00000419459 FGFR3P22607 806 aa13.45□□□□□ -0.26
LINC00642-201ENST00000419459 ADORA2BP29275 332 aa13.45□□□□□ -0.26
LINC00642-201ENST00000419459 SKIV2L2P42285 1042 aaKnown RBP13.45□□□□□ -0.26
LINC00642-201ENST00000419459 LHX1P48742 406 aa13.45□□□□□ -0.26
LINC00642-201ENST00000419459 ARPP19P56211 112 aa13.45□□□□□ -0.26
LINC00642-201ENST00000419459 CDR2Q01850 454 aa13.45□□□□□ -0.26
LINC00642-201ENST00000419459 NAIF1Q69YI7 327 aaPredicted RBP13.45□□□□□ -0.26
LINC00642-201ENST00000419459 METTL23Q86XA0 190 aa13.45□□□□□ -0.26
LINC00642-201ENST00000419459 UBA3Q8TBC4 463 aa13.45□□□□□ -0.26
LINC00642-201ENST00000419459 SLC2A14Q8TDB8 520 aa13.45□□□□□ -0.26
LINC00642-201ENST00000419459 CPA5Q8WXQ8 436 aa13.45□□□□□ -0.26
LINC00642-201ENST00000419459 SPDL1Q96EA4 605 aa13.45□□□□□ -0.26
LINC00642-201ENST00000419459 PCED1BQ96HM7 432 aa13.45□□□□□ -0.26
LINC00642-201ENST00000419459 PGLYRP2Q96PD5 576 aa13.45□□□□□ -0.26
LINC00642-201ENST00000419459 TTPALQ9BTX7 342 aa13.45□□□□□ -0.26
LINC00642-201ENST00000419459 TMLHEQ9NVH6 421 aa13.45□□□□□ -0.26
LINC00642-201ENST00000419459 SPG21Q9NZD8 308 aa13.45□□□□□ -0.26
LINC00642-201ENST00000419459 USP15Q9Y4E8 981 aaPredicted RBP13.45□□□□□ -0.26
LINC00642-201ENST00000419459 ADAM12O43184 909 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 SUN1O94901 812 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 EFEMP2O95967 443 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 PTPN1P18031 435 aaKnown RBP13.44□□□□□ -0.26
LINC00642-201ENST00000419459 CA8P35219 290 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 NCALDP61601 193 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 SARNPP82979 210 aaKnown RBP13.44□□□□□ -0.26
LINC00642-201ENST00000419459 SGO2Q562F6 1265 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 CAPRIN2Q6IMN6 1127 aaKnown RBP13.44□□□□□ -0.26
LINC00642-201ENST00000419459 KIAA1841Q6NSI8 718 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 DAAM2Q86T65 1068 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 UNC93AQ86WB7 457 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 RNF168Q8IYW5 571 aaPredicted RBP13.44□□□□□ -0.26
LINC00642-201ENST00000419459 VPS52Q8N1B4 723 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 TEX9Q8N6V9 391 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 ZNF483Q8TF39 744 aaPredicted RBP13.44□□□□□ -0.26
LINC00642-201ENST00000419459 THOC1Q96FV9 657 aaKnown RBP13.44□□□□□ -0.26
LINC00642-201ENST00000419459 RUNDC3BQ96NL0 473 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 ELAC2Q9BQ52 826 aaKnown RBP13.44□□□□□ -0.26
LINC00642-201ENST00000419459 ROPN1BQ9BZX4 212 aaPredicted RBP13.44□□□□□ -0.26
LINC00642-201ENST00000419459 DPH5Q9H2P9 285 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 ROPN1Q9HAT0 212 aaPredicted RBP13.44□□□□□ -0.26
LINC00642-201ENST00000419459 TMEM30AQ9NV96 361 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 MTRF1LQ9UGC7 380 aaKnown RBP13.44□□□□□ -0.26
LINC00642-201ENST00000419459 CHORDC1Q9UHD1 332 aaPredicted RBP13.44□□□□□ -0.26
LINC00642-201ENST00000419459 DSEQ9UL01 958 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 VCANP13611 3396 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 M0QYV0 167 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 PIK3R2O00459 728 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 SYN3O14994 580 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 RARAP10276 462 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 TYMPP19971 482 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 TNFAIP3P21580 790 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 COPS2P61201 443 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 BNIP1Q12981 228 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 USP41Q3LFD5 358 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 CTXN3Q4LDR2 81 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 TTC30AQ86WT1 665 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 TDHQ8IZJ6 230 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 TNIP3Q96KP6 325 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 SLC24A3Q9HC58 644 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 ARHGEF3Q9NR81 526 aa13.44□□□□□ -0.26
LINC00642-201ENST00000419459 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC00642-201ENST00000419459 BEST1O76090 585 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 MICAL2O94851 1124 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 OAZ2O95190 189 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms