RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 TRMT13Q9NUP7 481 aaKnown RBP9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 EURLQ9NYK6 297 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 LGALS13Q9UHV8 139 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 PHF24Q9UPV7 400 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 SF3B1O75533 1304 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 SCN5AQ14524 2016 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 A0A1W2PQ45 241 aaPredicted RBP9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 A0A1W2PQY0 241 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 CASTOR2A6NHX0 329 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 SGK1O00141 431 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 CLDN5O00501 218 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 APOL1O14791 398 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 RASGRF2O14827 1237 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 BEST1O76090 585 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 EOMESO95936 686 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 INHAP05111 366 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 RBP3P10745 1247 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 COL6A1P12109 1028 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 LCP1P13796 627 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 TSHRP16473 764 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 ZFXP17010 805 aaPredicted RBP9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 ACAT1P24752 427 aaKnown RBP9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 RPL22P35268 128 aaKnown RBP9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 MDH1P40925 334 aaKnown RBP9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 MAGEA6P43360 314 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 VPS41P49754 854 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 IRAK1P51617 712 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 AIF1P55008 147 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 GDF10P55107 478 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 DYNLT1P63172 113 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 ROR1Q01973 937 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 XRCC4Q13426 336 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 AUHQ13825 339 aaKnown RBP9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 KRT81Q14533 505 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 MBTPS1Q14703 1052 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 RASA2Q15283 850 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 ZC3H12AQ5D1E8 599 aaKnown RBP9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 INTS6LQ5JSJ4 861 aaKnown RBP9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 LRRC31Q6UY01 552 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 DSTYKQ6XUX3 929 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 BEND5Q7L4P6 421 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 PRUNE1Q86TP1 453 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 CCDC25Q86WR0 208 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 UNC45BQ8IWX7 931 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 PPIL6Q8IXY8 311 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 RIBC1Q8N443 379 aaPredicted RBP9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 NAT8LQ8N9F0 302 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 ZMIZ2Q8NF64 920 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 PCDH19Q8TAB3 1148 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 RAET1EQ8TD07 263 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 LINC01599Q8WXQ3 324 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 IRGQQ8WZA9 623 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 CPT1BQ92523 772 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 NTAN1Q96AB6 310 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 SMARCD1Q96GM5 515 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 PCED1BQ96HM7 432 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 KCTD15Q96SI1 283 aaPredicted RBP9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 RBM15Q96T37 977 aaKnown RBP eCLIP9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 SLC9A7Q96T83 725 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 PAAF1Q9BRP4 392 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 NRDE2Q9H7Z3 1164 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 CNOT10Q9H9A5 744 aaKnown RBP9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 PPCSQ9HAB8 311 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 USP29Q9HBJ7 922 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 CNGB3Q9NQW8 809 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 TMEM30AQ9NV96 361 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 GPATCH2LQ9NWQ4 482 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 RRN3Q9NYV6 651 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 CACNG4Q9UBN1 327 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 FZD10Q9ULW2 581 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 STAP1Q9ULZ2 295 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 NOVA2Q9UNW9 492 aaKnown RBP9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 AP4E1Q9UPM8 1137 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 NOD1Q9Y239 953 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 DOCK4Q8N1I0 1966 aa9.43□□□□□ -0.9
LINCMD1-201ENST00000418518 MYBPHLA2RUH7 354 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 ALOX15BO15296 676 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 TRPA1O75762 1119 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 ZNF189O75820 626 aaPredicted RBP9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 AP1G2O75843 785 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 IVLP07476 585 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 ZSCAN5DPP0CG00 497 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 ETS1P14921 441 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 CYP2F1P24903 491 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 RDXP35241 583 aaKnown RBP9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 MAGEA4P43358 317 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 MMP13P45452 471 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 NR2C2P49116 596 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 CTCFP49711 727 aaPredicted RBP9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 SULT1E1P49888 294 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 APLP1P51693 650 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 YWHAZP63104 245 aaKnown RBP9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 GNGT1P63211 74 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 SCAPQ12770 1279 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 KCNJ11Q14654 390 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 STAT4Q14765 748 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 ARHGEF6Q15052 776 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 DCLRE1AQ6PJP8 1040 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 C4orf22Q6V702 233 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 LEKR1Q6ZMV7 388 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms