RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ADRB2P07550 413 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 BPGMP07738 259 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 PRDX6P30041 224 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 PPARGP37231 505 aaPredicted RBP8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 PSMD6Q15008 389 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 ANKDD1AQ495B1 522 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 ZFYVE27Q5T4F4 411 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 ANGEL2Q5VTE6 544 aaKnown RBP8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 RWDD4Q6NW29 188 aaKnown RBP8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 ARCQ7LC44 396 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 OTOP1Q7RTM1 612 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 SLC26A11Q86WA9 606 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 EFCAB3Q8N7B9 438 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 TRIML2Q8N7C3 387 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 PIWIL2Q8TC59 973 aaKnown RBP8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 XPO7Q9UIA9 1087 aaKnown RBP8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 HERC5Q9UII4 1024 aaKnown RBP8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 A0A1B0GTW7 788 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 TLR3O15455 904 aaKnown RBP8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 KRT37O76014 449 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 FOSP01100 380 aaPredicted RBP8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 TCF4P15884 667 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 ZNF12P17014 697 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 ELK3P41970 407 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 BCAP31P51572 246 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 RHBDL3P58872 404 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 GABPAQ06546 454 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 TFDP3Q5H9I0 405 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 ZNF362Q5T0B9 420 aaPredicted RBP8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 PLEKHA7Q6IQ23 1121 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 FRMD7Q6ZUT3 714 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 TMEM110Q86TL2 294 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 TFB1MQ8WVM0 346 aaKnown RBP8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 ZNF778Q96MU6 729 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 NACC1Q96RE7 527 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 APOL6Q9BWW8 343 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 SLC38A7Q9NVC3 462 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 TUBA8Q9NY65 449 aaPredicted RBP8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 DOLKQ9UPQ8 538 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 CLEC11AQ9Y240 323 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 ZNF652Q9Y2D9 606 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 PSME4Q14997 1843 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 KBTBD13C9JR72 458 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 C6orf229H3BNL8 230 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 SPAG6O75602 509 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 SNRPAP09012 282 aaKnown RBP8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 WEE2P0C1S8 567 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 TFPTP0C1Z6 253 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 MYL4P12829 197 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 RXRGP48443 463 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 GDF10P55107 478 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 PDK1Q15118 436 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 ZFP1Q6P2D0 407 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 DCDC5Q6ZRR9 648 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 FBXL13Q8NEE6 735 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 APBB2Q92870 758 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 SNX27Q96L92 541 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 ACCSQ96QU6 501 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 NEURL2Q9BR09 285 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 C11orf70Q9BRQ4 267 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 SHCBP1LQ9BZQ2 653 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 TMEM8AQ9HCN3 771 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 STK39Q9UEW8 545 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 PCDHB2Q9Y5E7 798 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 SCINQ9Y6U3 715 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 RFPL1O75677 317 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 GSTT2P0CG29 244 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 GSTT2BP0CG30 244 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 DSG3P32926 999 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 RPL22P35268 128 aaKnown RBP8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 GCNT1Q02742 428 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 FAM98CQ17RN3 349 aaKnown RBP8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 MAP7D1Q3KQU3 841 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 RC3H1Q5TC82 1133 aaKnown RBP8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 LRRC38Q5VT99 294 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 ENOSF1Q7L5Y1 443 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 CHERPQ8IWX8 916 aaKnown RBP8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 TAS1R2Q8TE23 839 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 BORCS5Q969J3 196 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 VCPIP1Q96JH7 1222 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 NUF2Q9BZD4 464 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 WRAP73Q9P2S5 460 aaPredicted RBP8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 ARHGAP26Q9UNA1 814 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 TEX264Q9Y6I9 313 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 IGLV3-22A0A075B6J6 115 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 CHMP2AO43633 222 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 C1QAP02745 245 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 OCM2P0CE71 109 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 OCMP0CE72 109 aaPredicted RBP8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 PSMC3P17980 439 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 CDKN2BP42772 138 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 FAM182BQ5T319 152 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 ZCCHC23Q6ZST2 131 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 HSPH1Q92598 858 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 SENP7Q9BQF6 1050 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 CDCA7Q9BWT1 371 aaPredicted RBP8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 SLC13A1Q9BZW2 595 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 IP6K2Q9UHH9 426 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 IVNS1ABPQ9Y6Y0 642 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 GREB1LQ9C091 1923 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms