RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 ATP2C1P98194 919 aaPredicted RBP6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 IL10RAQ13651 578 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 HLTFQ14527 1009 aaKnown RBP eCLIP6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 TBR1Q16650 682 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 MST1LQ2TV78 715 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 PGS1Q32NB8 556 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 ZNF568Q3ZCX4 644 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 ANO1Q5XXA6 986 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 PPP4R3AQ6IN85 833 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 C17orf99Q6UX52 265 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 Q6ZVL8 140 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 CCAR1Q8IX12 1150 aaKnown RBP6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 ANKRD35Q8N283 1001 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 OR14K1Q8NGZ2 314 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 DIS3LQ8TF46 1054 aaKnown RBP6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 HOXB13Q92826 284 aaPredicted RBP6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 TAAR1Q96RJ0 339 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 PORCNQ9H237 461 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 SLC6A15Q9H2J7 730 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 R3HDMLQ9H3Y0 253 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 A1CFQ9NQ94 594 aaKnown RBP6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 C1orf112Q9NSG2 853 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 CYP39A1Q9NYL5 469 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 RTEL1Q9NZ71 1219 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 CFAP45Q9UL16 551 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 CNPY2Q9Y2B0 182 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 PCDHA13Q9Y5I0 950 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 A0A0G2JMZ2 1700 aa6.55□□□□□ -1.36
NIFKP3-201ENST00000417799 CYP3A7-CYP3A51PA0A087WV96 503 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 ARHGAP6O43182 974 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 STRNO43815 780 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 EDIL3O43854 480 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 B4GALT4O60513 344 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 CYP3A4P08684 503 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 FCER1AP12319 257 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 CYP3A7P24462 503 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 SREBF1P36956 1147 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 KCNC1P48547 511 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 PER3P56645 1201 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 GJA9P57773 515 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 CEBPZQ03701 1054 aaKnown RBP6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 KCTD2Q14681 263 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 LETM2Q2VYF4 491 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 WDR78Q5VTH9 848 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 SLC30A10Q6XR72 485 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 PLEKHH3Q7Z736 793 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 NEK8Q86SG6 692 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 RHOT1Q8IXI2 618 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 ABRAQ8N0Z2 381 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 ANKRD53Q8N9V6 530 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 NSUN6Q8TEA1 469 aaKnown RBP6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 ZNF480Q8WV37 535 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 CRYGNQ8WXF5 182 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 KAT5Q92993 513 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 C1GALT1C1Q96EU7 318 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 USP28Q96RU2 1077 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 RMDN3Q96TC7 470 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 NAP1L4Q99733 375 aaKnown RBP6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 ACO2Q99798 780 aaKnown RBP6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 KRTAP4-2Q9BYR5 136 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 FTOQ9C0B1 505 aaKnown RBP eCLIP6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 SCAND2PQ9GZW5 306 aaPredicted RBP6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 JADE2Q9NQC1 790 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 RNF186Q9NXI6 227 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 COL20A1Q9P218 1284 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 RCOR1Q9UKL0 485 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 NR2E1Q9Y466 385 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 CLIC4Q9Y696 253 aa6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 CFAP20Q9Y6A4 193 aaKnown RBP6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 COL11A1P12107 1806 aaPredicted RBP6.54□□□□□ -1.36
NIFKP3-201ENST00000417799 FRMPD4Q14CM0 1322 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 SLC15A5A6NIM6 579 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 MTSS1O43312 755 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 FIBPO43427 364 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 CCNT1O60563 726 aaKnown RBP6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 YEATS4O95619 227 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 BMP15O95972 392 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 RPLP2P05387 115 aaKnown RBP6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 JUNP05412 331 aaKnown RBP6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 KRT18P05783 430 aaKnown RBP6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 PGK2P07205 417 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 C8AP07357 584 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 VSIG10L2P0DP72 767 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 GCFC2P16383 781 aaKnown RBP6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 CIITAP33076 1130 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 MCM7P33993 719 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 UBXN2AP68543 259 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 CNTN2Q02246 1040 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 HGFACQ04756 655 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 ORC2Q13416 577 aaPredicted RBP6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 NFYCQ13952 458 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 GBX1Q14549 363 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 GRM3Q14832 879 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 ACAP1Q15027 740 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 SLC39A14Q15043 492 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 PGM5Q15124 567 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 STK38Q15208 465 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 PTPAQ15257 358 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 RNF151Q2KHN1 245 aa6.53□□□□□ -1.36
NIFKP3-201ENST00000417799 ARHGEF16Q5VV41 709 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms