RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ZC3H3Q8IXZ2 948 aaKnown RBP19.08■□□□□ 0.64
VCP-202ENST00000417448 THEM5Q8N1Q8 247 aa19.08■□□□□ 0.64
VCP-202ENST00000417448 DEFB119Q8N690 84 aa19.08■□□□□ 0.64
VCP-202ENST00000417448 ARL14EPQ8N8R7 260 aaPredicted RBP19.08■□□□□ 0.64
VCP-202ENST00000417448 PNPLA1Q8N8W4 532 aa19.08■□□□□ 0.64
VCP-202ENST00000417448 TMC2Q8TDI7 906 aa19.08■□□□□ 0.64
VCP-202ENST00000417448 ADAMTS14Q8WXS8 1223 aa19.08■□□□□ 0.64
VCP-202ENST00000417448 HPDLQ96IR7 371 aa19.08■□□□□ 0.64
VCP-202ENST00000417448 LRIG1Q96JA1 1093 aa19.08■□□□□ 0.64
VCP-202ENST00000417448 SRRTQ9BXP5 876 aaKnown RBP19.08■□□□□ 0.64
VCP-202ENST00000417448 PCDHB5Q9Y5E4 795 aa19.08■□□□□ 0.64
VCP-202ENST00000417448 C2orf78A6NCI8 922 aa19.07■□□□□ 0.64
VCP-202ENST00000417448 HCRTO43612 131 aa19.07■□□□□ 0.64
VCP-202ENST00000417448 ADAM23O75077 832 aa19.07■□□□□ 0.64
VCP-202ENST00000417448 KLF8O95600 359 aaPredicted RBP19.07■□□□□ 0.64
VCP-202ENST00000417448 SERPINF2P08697 491 aa19.07■□□□□ 0.64
VCP-202ENST00000417448 EPB41P11171 864 aaKnown RBP19.07■□□□□ 0.64
VCP-202ENST00000417448 KRT13P13646 458 aa19.07■□□□□ 0.64
VCP-202ENST00000417448 PAX3P23760 479 aa19.07■□□□□ 0.64
VCP-202ENST00000417448 HOXD12P35452 270 aa19.07■□□□□ 0.64
VCP-202ENST00000417448 MRPS21P82921 87 aaKnown RBP19.07■□□□□ 0.64
VCP-202ENST00000417448 GFPT1Q06210 699 aaPredicted RBP19.07■□□□□ 0.64
VCP-202ENST00000417448 NR1H3Q13133 447 aa19.07■□□□□ 0.64
VCP-202ENST00000417448 DUOXA1Q1HG43 343 aa19.07■□□□□ 0.64
VCP-202ENST00000417448 SV2CQ496J9 727 aa19.07■□□□□ 0.64
VCP-202ENST00000417448 METTL23Q86XA0 190 aa19.07■□□□□ 0.64
VCP-202ENST00000417448 HMGB4Q8WW32 186 aa19.07■□□□□ 0.64
VCP-202ENST00000417448 TRMT2BQ96GJ1 504 aaKnown RBP19.07■□□□□ 0.64
VCP-202ENST00000417448 MYRFLQ96LU7 910 aa19.07■□□□□ 0.64
VCP-202ENST00000417448 SNX9Q9Y5X1 595 aa19.07■□□□□ 0.64
VCP-202ENST00000417448 TENM4Q6N022 2769 aa19.07■□□□□ 0.64
VCP-202ENST00000417448 SH3BP5O60239 455 aa19.06■□□□□ 0.64
VCP-202ENST00000417448 CLSTN1O94985 981 aa19.06■□□□□ 0.64
VCP-202ENST00000417448 NFATC1O95644 943 aa19.06■□□□□ 0.64
VCP-202ENST00000417448 FTH1P19P0C7X4 201 aa19.06■□□□□ 0.64
VCP-202ENST00000417448 CYP2F1P24903 491 aa19.06■□□□□ 0.64
VCP-202ENST00000417448 TIE1P35590 1138 aa19.06■□□□□ 0.64
VCP-202ENST00000417448 DPP6P42658 865 aa19.06■□□□□ 0.64
VCP-202ENST00000417448 CLDN10P78369 228 aa19.06■□□□□ 0.64
VCP-202ENST00000417448 TRPC3Q13507 836 aa19.06■□□□□ 0.64
VCP-202ENST00000417448 TRIP6Q15654 476 aaKnown RBP19.06■□□□□ 0.64
VCP-202ENST00000417448 CCDC142Q17RM4 750 aa19.06■□□□□ 0.64
VCP-202ENST00000417448 DCAF17Q5H9S7 520 aaPredicted RBP19.06■□□□□ 0.64
VCP-202ENST00000417448 CCDC183Q5T5S1 534 aa19.06■□□□□ 0.64
VCP-202ENST00000417448 EMC10Q5UCC4 262 aa19.06■□□□□ 0.64
VCP-202ENST00000417448 TCERG1LQ5VWI1 586 aa19.06■□□□□ 0.64
VCP-202ENST00000417448 SV2AQ7L0J3 742 aa19.06■□□□□ 0.64
VCP-202ENST00000417448 OSTM1Q86WC4 334 aa19.06■□□□□ 0.64
VCP-202ENST00000417448 CREBRFQ8IUR6 639 aa19.06■□□□□ 0.64
VCP-202ENST00000417448 DCP1BQ8IZD4 617 aaKnown RBP19.06■□□□□ 0.64
VCP-202ENST00000417448 ZNF560Q96MR9 790 aa19.06■□□□□ 0.64
VCP-202ENST00000417448 DNAAF2Q9NVR5 837 aaKnown RBP19.06■□□□□ 0.64
VCP-202ENST00000417448 BCCIPQ9P287 314 aaKnown RBP eCLIP19.06■□□□□ 0.64
VCP-202ENST00000417448 L1RE1Q9UN81 338 aa19.06■□□□□ 0.64
VCP-202ENST00000417448 R3HCC1Q9Y3T6 440 aaKnown RBP19.06■□□□□ 0.64
VCP-202ENST00000417448 BICDL2A1A5D9 508 aa19.05■□□□□ 0.64
VCP-202ENST00000417448 ARHGAP33O14559 1287 aa19.05■□□□□ 0.64
VCP-202ENST00000417448 MAPK13O15264 365 aa19.05■□□□□ 0.64
VCP-202ENST00000417448 GJB3O75712 270 aa19.05■□□□□ 0.64
VCP-202ENST00000417448 CYP17A1P05093 508 aa19.05■□□□□ 0.64
VCP-202ENST00000417448 TCF3P15923 654 aa19.05■□□□□ 0.64
VCP-202ENST00000417448 SLC6A11P48066 632 aa19.05■□□□□ 0.64
VCP-202ENST00000417448 CCDC40Q4G0X9 1142 aa19.05■□□□□ 0.64
VCP-202ENST00000417448 HSP90AA4PQ58FG1 418 aa19.05■□□□□ 0.64
VCP-202ENST00000417448 SPOPLQ6IQ16 392 aa19.05■□□□□ 0.64
VCP-202ENST00000417448 RBM43Q6ZSC3 357 aaKnown RBP19.05■□□□□ 0.64
VCP-202ENST00000417448 INTS8Q75QN2 995 aaKnown RBP19.05■□□□□ 0.64
VCP-202ENST00000417448 C12orf40Q86WS4 652 aa19.05■□□□□ 0.64
VCP-202ENST00000417448 LRRC52Q8N7C0 313 aa19.05■□□□□ 0.64
VCP-202ENST00000417448 MLKLQ8NB16 471 aa19.05■□□□□ 0.64
VCP-202ENST00000417448 CEP76Q8TAP6 659 aa19.05■□□□□ 0.64
VCP-202ENST00000417448 CRELD1Q96HD1 420 aa19.05■□□□□ 0.64
VCP-202ENST00000417448 CACNA2D2Q9NY47 1150 aa19.05■□□□□ 0.64
VCP-202ENST00000417448 UXTQ9UBK9 157 aaPredicted RBP19.05■□□□□ 0.64
VCP-202ENST00000417448 NXF1Q9UBU9 619 aaKnown RBP19.05■□□□□ 0.64
VCP-202ENST00000417448 RWDD2AQ9UIY3 292 aa19.05■□□□□ 0.64
VCP-202ENST00000417448 ARHGAP26Q9UNA1 814 aa19.05■□□□□ 0.64
VCP-202ENST00000417448 SHROOM3Q8TF72 1996 aa19.04■□□□□ 0.64
VCP-202ENST00000417448 CFAP46Q8IYW2 2715 aa19.04■□□□□ 0.64
VCP-202ENST00000417448 TCRBV21S2A2A0A5A6 115 aa19.04■□□□□ 0.64
VCP-202ENST00000417448 HLA-DRAP01903 254 aa19.04■□□□□ 0.64
VCP-202ENST00000417448 ACAT1P24752 427 aaKnown RBP19.04■□□□□ 0.64
VCP-202ENST00000417448 PPP1R2P41236 205 aa19.04■□□□□ 0.64
VCP-202ENST00000417448 PNPLA4P41247 253 aa19.04■□□□□ 0.64
VCP-202ENST00000417448 KIR2DL1P43626 348 aaPredicted RBP19.04■□□□□ 0.64
VCP-202ENST00000417448 RPL6Q02878 288 aaKnown RBP19.04■□□□□ 0.64
VCP-202ENST00000417448 MYO1EQ12965 1108 aa19.04■□□□□ 0.64
VCP-202ENST00000417448 NCOA4Q13772 614 aa19.04■□□□□ 0.64
VCP-202ENST00000417448 HNRNPDQ14103 355 aaKnown RBP19.04■□□□□ 0.64
VCP-202ENST00000417448 SOWAHAQ2M3V2 549 aa19.04■□□□□ 0.64
VCP-202ENST00000417448 ZACNQ401N2 412 aa19.04■□□□□ 0.64
VCP-202ENST00000417448 C11orf57Q6ZUT1 292 aaPredicted RBP19.04■□□□□ 0.64
VCP-202ENST00000417448 FILIP1Q7Z7B0 1213 aa19.04■□□□□ 0.64
VCP-202ENST00000417448 PDCL2Q8N4E4 241 aa19.04■□□□□ 0.64
VCP-202ENST00000417448 TAS1R2Q8TE23 839 aa19.04■□□□□ 0.64
VCP-202ENST00000417448 MMS19Q96T76 1030 aa19.04■□□□□ 0.64
VCP-202ENST00000417448 XYLT2Q9H1B5 865 aa19.04■□□□□ 0.64
VCP-202ENST00000417448 POLMQ9NP87 494 aaPredicted RBP19.04■□□□□ 0.64
VCP-202ENST00000417448 SCUBE2Q9NQ36 999 aa19.04■□□□□ 0.64
VCP-202ENST00000417448 MYH10P35580 1976 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms