RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 USP46P62068 366 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 DYNLT1P63172 113 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 GUCY2DQ02846 1103 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 NME3Q13232 169 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 PPIGQ13427 754 aaKnown RBP eCLIP17.72■□□□□ 0.431e-6■■■■□ 24.6
CALD1-204ENST00000417172 USP41Q3LFD5 358 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 SLC25A52Q3SY17 297 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 TFDP3Q5H9I0 405 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 TMEM240Q5SV17 173 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 PM20D1Q6GTS8 502 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 CCDC70Q6NSX1 233 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 FBXO22Q8NEZ5 403 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 CMASQ8NFW8 434 aaPredicted RBP17.72■□□□□ 0.43
CALD1-204ENST00000417172 AUTS2Q8WXX7 1259 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 NPY6RQ99463 290 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 MTUS1Q9ULD2 1270 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 ZMYND8Q9ULU4 1186 aaPredicted RBP17.72■□□□□ 0.43
CALD1-204ENST00000417172 USP3Q9Y6I4 520 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 RANBP2P49792 3224 aaKnown RBP17.72■□□□□ 0.43
CALD1-204ENST00000417172 WDR27A2RRH5 827 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 M0QYT0 321 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 CAPN9O14815 690 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 NOS2P35228 1153 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 CDH6P55285 790 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 CLUL1Q15846 466 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 PSMD5Q16401 504 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 CYP1B1Q16678 543 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 WDR93Q6P2C0 686 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 SLC7A14Q8TBB6 771 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 FUBP3Q96I24 572 aaKnown RBP eCLIP17.72■□□□□ 0.43
CALD1-204ENST00000417172 SEPT5Q99719 369 aaPredicted RBP17.72■□□□□ 0.43
CALD1-204ENST00000417172 CALN1Q9BXU9 219 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 SLITRK6Q9H5Y7 841 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 EPB41L5Q9HCM4 733 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 PNPLA8Q9NP80 782 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 SAE1Q9UBE0 346 aaPredicted RBP17.72■□□□□ 0.43
CALD1-204ENST00000417172 CHD7Q9P2D1 2997 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 H7C4K7 107 aa17.71■□□□□ 0.43
CALD1-204ENST00000417172 OR1D2P34982 312 aa17.71■□□□□ 0.43
CALD1-204ENST00000417172 ROR1Q01973 937 aa17.71■□□□□ 0.43
CALD1-204ENST00000417172 DUSP4Q13115 394 aa17.71■□□□□ 0.43
CALD1-204ENST00000417172 GPR17Q13304 367 aa17.71■□□□□ 0.43
CALD1-204ENST00000417172 GLE1Q53GS7 698 aaKnown RBP17.71■□□□□ 0.43
CALD1-204ENST00000417172 BSPRYQ5W0U4 402 aa17.71■□□□□ 0.43
CALD1-204ENST00000417172 KIAA1841Q6NSI8 718 aa17.71■□□□□ 0.43
CALD1-204ENST00000417172 CCDC137Q6PK04 289 aaKnown RBP17.71■□□□□ 0.43
CALD1-204ENST00000417172 DDX42Q86XP3 938 aaKnown RBP eCLIP17.71■□□□□ 0.43
CALD1-204ENST00000417172 NT5C3BQ969T7 300 aa17.71■□□□□ 0.43
CALD1-204ENST00000417172 TMEM169Q96HH4 297 aa17.71■□□□□ 0.43
CALD1-204ENST00000417172 PIGVQ9NUD9 493 aa17.71■□□□□ 0.43
CALD1-204ENST00000417172 ZNF446Q9NWS9 450 aa17.71■□□□□ 0.43
CALD1-204ENST00000417172 MTRRQ9UBK8 725 aa17.71■□□□□ 0.43
CALD1-204ENST00000417172 LAMA3Q16787 3333 aa17.71■□□□□ 0.43
CALD1-204ENST00000417172 GJB5O95377 273 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 DNAJB2P25686 324 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 COILP38432 576 aaPredicted RBP17.7■□□□□ 0.42
CALD1-204ENST00000417172 PTGIRP43119 386 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 ARSEP51690 589 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 DR1Q01658 176 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 MTMR3Q13615 1198 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 DPYSL3Q14195 570 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 MGAT5BQ3V5L5 792 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 BNIPLQ7Z465 357 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 PYROXD2Q8N2H3 581 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 CASKIN2Q8WXE0 1202 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 PIK3R5Q8WYR1 880 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 DCLK3Q9C098 648 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 NUDT5Q9UKK9 219 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 SOD2P04179 222 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 LINC00271P0C7V0 271 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 LAG3P18627 525 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 CHRNA3P32297 505 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 COPS2P61201 443 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 VSTM1Q6UX27 236 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 STRADAQ7RTN6 431 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 SCD5Q86SK9 330 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 C12orf50Q8NA57 414 aaPredicted RBP17.7■□□□□ 0.42
CALD1-204ENST00000417172 CLSTN3Q9BQT9 956 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 TRIM31Q9BZY9 425 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 NMUR1Q9HB89 426 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 ANLNQ9NQW6 1124 aa17.7■□□□□ 0.42
CALD1-204ENST00000417172 LCHNA4D1U4 455 aa17.69■□□□□ 0.42
CALD1-204ENST00000417172 PTPN7P35236 360 aa17.69■□□□□ 0.42
CALD1-204ENST00000417172 CARSP49589 748 aaKnown RBP17.69■□□□□ 0.42
CALD1-204ENST00000417172 PPP2R5EQ16537 467 aa17.69■□□□□ 0.42
CALD1-204ENST00000417172 TAZQ16635 292 aa17.69■□□□□ 0.42
CALD1-204ENST00000417172 PPP6R3Q5H9R7 873 aaPredicted RBP17.69■□□□□ 0.42
CALD1-204ENST00000417172 JAMLQ86YT9 394 aa17.69■□□□□ 0.42
CALD1-204ENST00000417172 CCDC105Q8IYK2 499 aa17.69■□□□□ 0.42
CALD1-204ENST00000417172 C8orf48Q96LL4 319 aa17.69■□□□□ 0.42
CALD1-204ENST00000417172 GDAP1L1Q96MZ0 367 aa17.69■□□□□ 0.42
CALD1-204ENST00000417172 ZBED2Q9BTP6 218 aa17.69■□□□□ 0.42
CALD1-204ENST00000417172 DHX35Q9H5Z1 703 aaKnown RBP17.69■□□□□ 0.42
CALD1-204ENST00000417172 LRRC19Q9H756 370 aa17.69■□□□□ 0.42
CALD1-204ENST00000417172 PCDH18Q9HCL0 1135 aa17.69■□□□□ 0.42
CALD1-204ENST00000417172 OSER1Q9NX31 292 aa17.69■□□□□ 0.42
CALD1-204ENST00000417172 SPG21Q9NZD8 308 aa17.69■□□□□ 0.42
CALD1-204ENST00000417172 STAP1Q9ULZ2 295 aa17.69■□□□□ 0.42
CALD1-204ENST00000417172 AP4E1Q9UPM8 1137 aa17.69■□□□□ 0.42
CALD1-204ENST00000417172 CDH23Q9H251 3354 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms