RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 POPDC2Q9HBU9 364 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 MARCOQ9UEW3 520 aaPredicted RBP15.31■□□□□ 0.04
LINC00475-202ENST00000416438 MTO1Q9Y2Z2 717 aaKnown RBP15.31■□□□□ 0.04
LINC00475-202ENST00000416438 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.3■□□□□ 0.04
LINC00475-202ENST00000416438 FCHO1O14526 889 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 KRT36O76013 467 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 ZBED1O96006 694 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 PDHA1P08559 390 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 TSHRP16473 764 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 GRIA1P42261 906 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 BCAR1P56945 870 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 MRPS5P82675 430 aaKnown RBP15.3■□□□□ 0.04
LINC00475-202ENST00000416438 ACAP1Q15027 740 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 ACSBG2Q5FVE4 666 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 TTC39BQ5VTQ0 682 aaPredicted RBP15.3■□□□□ 0.04
LINC00475-202ENST00000416438 PMF1Q6P1K2 205 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 ILDR2Q71H61 639 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 SCUBE3Q8IX30 993 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 MPP5Q8N3R9 675 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 LPIN3Q9BQK8 851 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 B3GNT5Q9BYG0 378 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 ETNK2Q9NVF9 386 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 PAK5Q9P286 719 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 KIF1CO43896 1103 aaKnown RBP15.3■□□□□ 0.04
LINC00475-202ENST00000416438 GAS2O43903 313 aaKnown RBP15.3■□□□□ 0.04
LINC00475-202ENST00000416438 SMNDC1O75940 238 aaKnown RBP eCLIP15.3■□□□□ 0.04
LINC00475-202ENST00000416438 CSH1P0DML2 217 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 CSH2P0DML3 217 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 ESRRAP11474 423 aaPredicted RBP15.3■□□□□ 0.04
LINC00475-202ENST00000416438 ATXN1P54253 815 aaKnown RBP15.3■□□□□ 0.04
LINC00475-202ENST00000416438 Q3C1V9 767 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 WDR78Q5VTH9 848 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 PLPPR4Q7Z2D5 763 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 VPS52Q8N1B4 723 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 DTX3LQ8TDB6 740 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 FAM172AQ8WUF8 416 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 OXNAD1Q96HP4 312 aaPredicted RBP15.3■□□□□ 0.04
LINC00475-202ENST00000416438 RNF19AQ9NV58 838 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 GPRC5DQ9NZD1 345 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 MAD1L1Q9Y6D9 718 aa15.3■□□□□ 0.04
LINC00475-202ENST00000416438 APOL1O14791 398 aa15.29■□□□□ 0.04
LINC00475-202ENST00000416438 METTL18O95568 372 aa15.29■□□□□ 0.04
LINC00475-202ENST00000416438 VTNP04004 478 aa15.29■□□□□ 0.04
LINC00475-202ENST00000416438 OSBPP22059 807 aa15.29■□□□□ 0.04
LINC00475-202ENST00000416438 IRX4P78413 519 aa15.29■□□□□ 0.04
LINC00475-202ENST00000416438 BST1Q10588 318 aa15.29■□□□□ 0.04
LINC00475-202ENST00000416438 BLMHQ13867 455 aa15.29■□□□□ 0.04
LINC00475-202ENST00000416438 FAM47CQ5HY64 1035 aa15.29■□□□□ 0.04
LINC00475-202ENST00000416438 NOL9Q5SY16 702 aaKnown RBP15.29■□□□□ 0.04
LINC00475-202ENST00000416438 MROH9Q5TGP6 573 aa15.29■□□□□ 0.04
LINC00475-202ENST00000416438 ANO7Q6IWH7 933 aa15.29■□□□□ 0.04
LINC00475-202ENST00000416438 FBXO27Q8NI29 283 aa15.29■□□□□ 0.04
LINC00475-202ENST00000416438 ACAP3Q96P50 834 aa15.29■□□□□ 0.04
LINC00475-202ENST00000416438 SNRNP25Q9BV90 132 aaKnown RBP15.29■□□□□ 0.04
LINC00475-202ENST00000416438 TRIM6Q9C030 488 aaPredicted RBP15.29■□□□□ 0.04
LINC00475-202ENST00000416438 C20orf27Q9GZN8 174 aa15.29■□□□□ 0.04
LINC00475-202ENST00000416438 MIS12Q9H081 205 aa15.29■□□□□ 0.04
LINC00475-202ENST00000416438 DCLRE1BQ9H816 532 aa15.29■□□□□ 0.04
LINC00475-202ENST00000416438 PCDH18Q9HCL0 1135 aa15.29■□□□□ 0.04
LINC00475-202ENST00000416438 TXNRD2Q9NNW7 524 aa15.29■□□□□ 0.04
LINC00475-202ENST00000416438 FAM49BQ9NUQ9 324 aa15.29■□□□□ 0.04
LINC00475-202ENST00000416438 RFPL1O75677 317 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 TGDSO95455 350 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 SNRPAP09012 282 aaKnown RBP15.28■□□□□ 0.04
LINC00475-202ENST00000416438 TMPRSS15P98073 1019 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 RCN1Q15293 331 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 SMAD1Q15797 465 aaKnown RBP15.28■□□□□ 0.04
LINC00475-202ENST00000416438 GOLGA7BQ2TAP0 167 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 PPP1R26Q5T8A7 1209 aaPredicted RBP15.28■□□□□ 0.04
LINC00475-202ENST00000416438 UNC5AQ6ZN44 842 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 ARID3BQ8IVW6 561 aaPredicted RBP15.28■□□□□ 0.04
LINC00475-202ENST00000416438 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.28■□□□□ 0.04
LINC00475-202ENST00000416438 FBXO41Q8TF61 875 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 MCUR1Q96AQ8 359 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 PDZD7Q9H5P4 517 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 SLC24A3Q9HC58 644 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 GBA2Q9HCG7 927 aaPredicted RBP15.28■□□□□ 0.04
LINC00475-202ENST00000416438 BARX2Q9UMQ3 279 aaPredicted RBP15.28■□□□□ 0.04
LINC00475-202ENST00000416438 PLLPQ9Y342 182 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 POLR2AP24928 1970 aaKnown RBP15.28■□□□□ 0.04
LINC00475-202ENST00000416438 SLC15A5A6NIM6 579 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 DNAJC6O75061 913 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 TXNP10599 105 aaKnown RBP15.28■□□□□ 0.04
LINC00475-202ENST00000416438 CHI3L2Q15782 390 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 AMHR2Q16671 573 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 ZCCHC23Q6ZST2 131 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 TREML1Q86YW5 311 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 UNC5BQ8IZJ1 945 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 NETO2Q8NC67 525 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 OSBPL1AQ9BXW6 950 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 ARHGEF4Q9NR80 690 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 PCMTD2Q9NV79 361 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 LTBP3Q9NS15 1303 aa15.28■□□□□ 0.04
LINC00475-202ENST00000416438 HMX2A2RU54 273 aa15.27■□□□□ 0.04
LINC00475-202ENST00000416438 CNMDO75829 334 aa15.27■□□□□ 0.04
LINC00475-202ENST00000416438 GABBR2O75899 941 aa15.27■□□□□ 0.04
LINC00475-202ENST00000416438 KRT37O76014 449 aa15.27■□□□□ 0.04
LINC00475-202ENST00000416438 INSRRP14616 1297 aa15.27■□□□□ 0.04
LINC00475-202ENST00000416438 ARF4P18085 180 aaPredicted RBP15.27■□□□□ 0.04
LINC00475-202ENST00000416438 GBE1Q04446 702 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms