RNA–Protein interactions for RNA: ENST00000414044.1

VTA1P1-201, Transcript of vesicle trafficking 1 pseudogene 1, humanhuman

BASIC

Gene VTA1P1, Length 866 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1P1-201ENST00000414044 SUV39H1O43463 412 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 TAF5LO75529 589 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 GPANK1O95872 356 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 TFRCP02786 760 aaKnown RBP5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 HLA-DOAP06340 250 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 HNRNPA1P09651 372 aaKnown RBP eCLIP5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 ACO1P21399 889 aaKnown RBP5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 PRKAR1BP31321 381 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 MSX2P35548 267 aaPredicted RBP5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 NPTX2P47972 431 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 CDK7P50613 346 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 FOXL1Q12952 345 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 PRKG2Q13237 762 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 ANKRD1Q15327 319 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 GALNTL6Q49A17 601 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 PREPLQ4J6C6 727 aaPredicted RBP5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 ATG16L1Q676U5 607 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 NAIF1Q69YI7 327 aaPredicted RBP5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 KRTAP5-3Q6L8H2 238 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 FOXR2Q6PJQ5 311 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 SYT13Q7L8C5 426 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 ANKRD35Q8N283 1001 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 UCMAQ8WVF2 138 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 ZUFSPQ96AP4 578 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 ZSWIM1Q9BR11 485 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 SCAND2PQ9GZW5 306 aaPredicted RBP5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 OLA1Q9NTK5 396 aaKnown RBP5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 RNF181Q9P0P0 153 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 USP15Q9Y4E8 981 aaPredicted RBP5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 AFG3L2Q9Y4W6 797 aa5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.4□□□□□ -1.54
VTA1P1-201ENST00000414044 PRAMEF33A0A0G2JMD5 474 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 A0A1W2PS29 197 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 A6NCN8 305 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 KIF28PB7ZC32 967 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 DIRC3C9JPN6 131 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 F5H0A9 414 aaPredicted RBP5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 PRAMEF10O60809 474 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 ERN1O75460 977 aaKnown RBP5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 LMNAP02545 664 aaKnown RBP5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 ADORA2AP29274 412 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 EPHA3P29320 983 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 CD6P30203 668 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 UQCRC1P31930 480 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 APOBEC3AP31941 199 aaPredicted RBP5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 HTR7P34969 479 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 GATMP50440 423 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 PDE6CP51160 858 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 RBM5P52756 815 aaKnown RBP eCLIP5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 RABGGTBP53611 331 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 OCA2Q04671 838 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 SF3A3Q12874 501 aaKnown RBP eCLIP5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 FHL3Q13643 280 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 RBM20Q5T481 1227 aaKnown RBP5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 CCDC30Q5VVM6 783 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 DGAT2L7PQ6IED9 249 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 HTR3DQ70Z44 454 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 TRABD2AQ86V40 505 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 ADGRG5Q8IZF4 528 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 Q8N1X5 172 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 FSTL5Q8N475 847 aaPredicted RBP5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 Q8NA96 180 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 USP38Q8NB14 1042 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 SUN3Q8TAQ9 357 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 SNRNP27Q8WVK2 155 aaKnown RBP5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 HMGB4Q8WW32 186 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 RFFLQ8WZ73 363 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 ZBTB45Q96K62 511 aaPredicted RBP5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 C7orf26Q96N11 449 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 REEP2Q9BRK0 252 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 CHCHD6Q9BRQ6 235 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 MRIQ9BWK5 157 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 PAIP1Q9H074 479 aaKnown RBP5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 PLEKHA5Q9HAU0 1116 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 PREBQ9HCU5 417 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 AURKAIP1Q9NWT8 199 aaPredicted RBP5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 AASSQ9UDR5 926 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 KCND3Q9UK17 655 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 RIMKLBQ9ULI2 386 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 TBX20Q9UMR3 447 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 SSX2IPQ9Y2D8 614 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 DNAJC16Q9Y2G8 782 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 SLC45A1Q9Y2W3 748 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 SNX14Q9Y5W7 946 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 COL15A1P39059 1388 aa5.39□□□□□ -1.55
VTA1P1-201ENST00000414044 A0A087X0M5 115 aa5.38□□□□□ -1.55
VTA1P1-201ENST00000414044 A0A1B0GX30 115 aa5.38□□□□□ -1.55
VTA1P1-201ENST00000414044 FAM90A20PA6NIJ5 464 aa5.38□□□□□ -1.55
VTA1P1-201ENST00000414044 K7ENM7 598 aa5.38□□□□□ -1.55
VTA1P1-201ENST00000414044 ZNF185O15231 689 aa5.38□□□□□ -1.55
VTA1P1-201ENST00000414044 CYP27B1O15528 508 aa5.38□□□□□ -1.55
VTA1P1-201ENST00000414044 CBFA2T3O75081 653 aa5.38□□□□□ -1.55
VTA1P1-201ENST00000414044 LARGE1O95461 756 aa5.38□□□□□ -1.55
VTA1P1-201ENST00000414044 CER1O95813 267 aa5.38□□□□□ -1.55
VTA1P1-201ENST00000414044 MTHFSP49914 203 aa5.38□□□□□ -1.55
VTA1P1-201ENST00000414044 RNASE9P60153 205 aaKnown RBP5.38□□□□□ -1.55
VTA1P1-201ENST00000414044 DCAF7P61962 342 aa5.38□□□□□ -1.55
VTA1P1-201ENST00000414044 RPS7P62081 194 aaKnown RBP5.38□□□□□ -1.55
VTA1P1-201ENST00000414044 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms