RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 MECRQ9BV79 373 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 UNC45AQ9H3U1 944 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 CCDC134Q9H6E4 229 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 NOD2Q9HC29 1040 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 NKX1-2Q9UD57 310 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 SWAP70Q9UH65 585 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 STEAP1Q9UHE8 339 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 DERAQ9Y315 318 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 COL15A1P39059 1388 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 GAGE12BA1L429 117 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 GAGE12HA6NDE8 117 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 PSMD9O00233 223 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 IFIT1P09914 478 aaKnown RBP5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 TMEM225BP0DP42 221 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 DDX6P26196 483 aaKnown RBP eCLIP5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 MAN1A1P33908 653 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 CASP2P42575 452 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 ATXN1P54253 815 aaKnown RBP5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 EIF4A1P60842 406 aaKnown RBP5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 TOB2Q14106 344 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 ACOX1Q15067 660 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 HYIQ5T013 277 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 PIK3AP1Q6ZUJ8 805 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 KRT27Q7Z3Y8 459 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 CAND1Q86VP6 1230 aaKnown RBP5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 P3H2Q8IVL5 708 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 TOR1AIP2Q8NFQ8 470 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 XAGE5Q8WWM1 108 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 LPIN2Q92539 896 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 EDAQ92838 391 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 R3HDM4Q96D70 268 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 PTCD3Q96EY7 689 aaKnown RBP5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 REXO5Q96IC2 774 aaKnown RBP5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 WWC2-AS2Q96NR7 200 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 FMNL2Q96PY5 1086 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 TWSG1Q9GZX9 223 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 G6PC2Q9NQR9 355 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 TMEM74BQ9NUR3 256 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 IRAK4Q9NWZ3 460 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 ST6GALNAC2Q9UJ37 374 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 TCAF1Q9Y4C2 921 aa5.41□□□□□ -1.54
HMGB3P31-201ENST00000413333 A1L4Q6 167 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 MARCH11A6NNE9 402 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 STX16-NPEPL1H3BU86 382 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 STX16O14662 325 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 CBFA2T3O75081 653 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 RHOP08100 348 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 ACRV1P26436 265 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 LIPAP38571 399 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 CCR5P51681 352 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 CLCN2P51788 898 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 JAG1P78504 1218 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 CHRNDQ07001 517 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 CLCA4Q14CN2 919 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 SF3B3Q15393 1217 aaKnown RBP5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 SMAD1Q15797 465 aaKnown RBP5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 BEAN1Q3B7T3 259 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 ANKRD40Q6AI12 368 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 CCDC144NLQ6NUI1 221 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 TMPRSS6Q8IU80 811 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 SSH3Q8TE77 659 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 HDAC2Q92769 488 aaKnown RBP5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 RRP36Q96EU6 259 aaKnown RBP5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 LOXL4Q96JB6 756 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 TEPSINQ96N21 525 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 TWNKQ96RR1 684 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 ADAM2Q99965 735 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 PARD6AQ9NPB6 346 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 LIN7CQ9NUP9 197 aaKnown RBP5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 NFU1Q9UMS0 254 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 ARHGAP26Q9UNA1 814 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 JAG2Q9Y219 1238 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 TMEM98Q9Y2Y6 226 aa5.4□□□□□ -1.54
HMGB3P31-201ENST00000413333 LMTK3Q96Q04 1460 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 SLC16A3O15427 465 aaKnown RBP5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 LARGE1O95461 756 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 ITGB3P05106 788 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 FESP07332 822 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 FAM163BP0C2L3 166 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 PEPDP12955 493 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 CPA1P15085 419 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 THBS4P35443 961 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 NR1H2P55055 460 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 MTAPQ13126 283 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 SEMA3BQ13214 749 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 PRKD1Q15139 912 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 ANKRD1Q15327 319 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 TBCCQ15814 346 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 TREML2Q5T2D2 321 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 MAP3K21Q5TCX8 1036 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 DPY19L3Q6ZPD9 716 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 C1orf122Q6ZSJ8 110 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 LCNL1Q6ZST4 164 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 MAVSQ7Z434 540 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 ANKS1BQ7Z6G8 1248 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 DTX2Q86UW9 622 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 TCP11L2Q8N4U5 519 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 PCYOX1LQ8NBM8 494 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 CHST13Q8NET6 341 aa5.39□□□□□ -1.55
HMGB3P31-201ENST00000413333 MYCBPAPQ8TBZ2 947 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms