RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 OTUB2Q96DC9 234 aa18.63■□□□□ 0.57
LSM5-204ENST00000409909 ZSWIM1Q9BR11 485 aa18.63■□□□□ 0.57
LSM5-204ENST00000409909 CLSTN2Q9H4D0 955 aa18.63■□□□□ 0.57
LSM5-204ENST00000409909 SMG5Q9UPR3 1016 aaKnown RBP18.63■□□□□ 0.57
LSM5-204ENST00000409909 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.63■□□□□ 0.57
LSM5-204ENST00000409909 O00370 1275 aa18.62■□□□□ 0.57
LSM5-204ENST00000409909 CALCAP01258 141 aa18.62■□□□□ 0.57
LSM5-204ENST00000409909 AFPP02771 609 aaKnown RBP18.62■□□□□ 0.57
LSM5-204ENST00000409909 VDRP11473 427 aa18.62■□□□□ 0.57
LSM5-204ENST00000409909 ADH5P11766 374 aa18.62■□□□□ 0.57
LSM5-204ENST00000409909 PXNP49023 591 aaPredicted RBP18.62■□□□□ 0.57
LSM5-204ENST00000409909 PSEN1P49768 467 aa18.62■□□□□ 0.57
LSM5-204ENST00000409909 CETN1Q12798 172 aa18.62■□□□□ 0.57
LSM5-204ENST00000409909 CLEC17AQ6ZS10 378 aa18.62■□□□□ 0.57
LSM5-204ENST00000409909 TMEM25Q86YD3 366 aa18.62■□□□□ 0.57
LSM5-204ENST00000409909 IRF2BP1Q8IU81 584 aa18.62■□□□□ 0.57
LSM5-204ENST00000409909 ZNF276Q8N554 614 aa18.62■□□□□ 0.57
LSM5-204ENST00000409909 UBA3Q8TBC4 463 aa18.62■□□□□ 0.57
LSM5-204ENST00000409909 NDRG1Q92597 394 aaKnown RBP18.62■□□□□ 0.57
LSM5-204ENST00000409909 CLIC5Q9NZA1 410 aa18.62■□□□□ 0.57
LSM5-204ENST00000409909 DNMT3LQ9UJW3 386 aa18.62■□□□□ 0.57
LSM5-204ENST00000409909 KIAA1257Q9ULG3 409 aa18.62■□□□□ 0.57
LSM5-204ENST00000409909 SLC8A2Q9UPR5 921 aa18.62■□□□□ 0.57
LSM5-204ENST00000409909 PCDHB4Q9Y5E5 795 aa18.62■□□□□ 0.57
LSM5-204ENST00000409909 XPO1O14980 1071 aaKnown RBP18.61■□□□□ 0.57
LSM5-204ENST00000409909 PAEPP09466 180 aa18.61■□□□□ 0.57
LSM5-204ENST00000409909 CCDC192P0DO97 292 aa18.61■□□□□ 0.57
LSM5-204ENST00000409909 CHRM1P11229 460 aaPredicted RBP18.61■□□□□ 0.57
LSM5-204ENST00000409909 TKTL1P51854 596 aa18.61■□□□□ 0.57
LSM5-204ENST00000409909 BCAT1P54687 386 aa18.61■□□□□ 0.57
LSM5-204ENST00000409909 SEC13P55735 322 aa18.61■□□□□ 0.57
LSM5-204ENST00000409909 SLC8A3P57103 927 aa18.61■□□□□ 0.57
LSM5-204ENST00000409909 LPAL2Q16609 132 aa18.61■□□□□ 0.57
LSM5-204ENST00000409909 PKDCCQ504Y2 493 aa18.61■□□□□ 0.57
LSM5-204ENST00000409909 PM20D1Q6GTS8 502 aa18.61■□□□□ 0.57
LSM5-204ENST00000409909 LCLAT1Q6UWP7 414 aa18.61■□□□□ 0.57
LSM5-204ENST00000409909 BHLHA9Q7RTU4 235 aa18.61■□□□□ 0.57
LSM5-204ENST00000409909 WDR5BQ86VZ2 330 aa18.61■□□□□ 0.57
LSM5-204ENST00000409909 PHTF2Q8N3S3 785 aa18.61■□□□□ 0.57
LSM5-204ENST00000409909 USP33Q8TEY7 942 aa18.61■□□□□ 0.57
LSM5-204ENST00000409909 KREMEN1Q96MU8 473 aa18.61■□□□□ 0.57
LSM5-204ENST00000409909 PNKPQ96T60 521 aa18.61■□□□□ 0.57
LSM5-204ENST00000409909 HINFPQ9BQA5 517 aa18.61■□□□□ 0.57
LSM5-204ENST00000409909 INTS2Q9H0H0 1204 aaKnown RBP18.61■□□□□ 0.57
LSM5-204ENST00000409909 SPHK2Q9NRA0 654 aa18.61■□□□□ 0.57
LSM5-204ENST00000409909 A0A0A0MRY4 1105 aa18.6■□□□□ 0.57
LSM5-204ENST00000409909 HOXC11O43248 304 aaPredicted RBP18.6■□□□□ 0.57
LSM5-204ENST00000409909 FGFR1OPO95684 399 aaKnown RBP18.6■□□□□ 0.57
LSM5-204ENST00000409909 EIF2DP41214 584 aaKnown RBP18.6■□□□□ 0.57
LSM5-204ENST00000409909 PLA2G4AP47712 749 aa18.6■□□□□ 0.57
LSM5-204ENST00000409909 GCNT1Q02742 428 aa18.6■□□□□ 0.57
LSM5-204ENST00000409909 GAD2Q05329 585 aa18.6■□□□□ 0.57
LSM5-204ENST00000409909 BST2Q10589 180 aaKnown RBP18.6■□□□□ 0.57
LSM5-204ENST00000409909 C2orf27AQ580R0 203 aa18.6■□□□□ 0.57
LSM5-204ENST00000409909 SYT13Q7L8C5 426 aa18.6■□□□□ 0.57
LSM5-204ENST00000409909 MIB1Q86YT6 1006 aa18.6■□□□□ 0.57
LSM5-204ENST00000409909 ETFBKMTQ8IXQ9 262 aa18.6■□□□□ 0.57
LSM5-204ENST00000409909 KIAA2013Q8IYS2 634 aa18.6■□□□□ 0.57
LSM5-204ENST00000409909 NAT16Q8N8M0 369 aa18.6■□□□□ 0.57
LSM5-204ENST00000409909 MLKLQ8NB16 471 aa18.6■□□□□ 0.57
LSM5-204ENST00000409909 ULBP1Q9BZM6 244 aa18.6■□□□□ 0.57
LSM5-204ENST00000409909 HESX1Q9UBX0 185 aa18.6■□□□□ 0.57
LSM5-204ENST00000409909 CEP250Q9BV73 2442 aa18.6■□□□□ 0.57
LSM5-204ENST00000409909 GABBR2O75899 941 aa18.59■□□□□ 0.57
LSM5-204ENST00000409909 STC2O76061 302 aa18.59■□□□□ 0.57
LSM5-204ENST00000409909 KAT7O95251 611 aa18.59■□□□□ 0.57
LSM5-204ENST00000409909 ZBED1O96006 694 aa18.59■□□□□ 0.57
LSM5-204ENST00000409909 RALAP11233 206 aa18.59■□□□□ 0.57
LSM5-204ENST00000409909 CNR2P34972 360 aa18.59■□□□□ 0.57
LSM5-204ENST00000409909 ZNF132P52740 706 aa18.59■□□□□ 0.57
LSM5-204ENST00000409909 YWHAGP61981 247 aaKnown RBP eCLIP18.59■□□□□ 0.57
LSM5-204ENST00000409909 KDSRQ06136 332 aa18.59■□□□□ 0.57
LSM5-204ENST00000409909 SIM2Q14190 667 aaPredicted RBP18.59■□□□□ 0.57
LSM5-204ENST00000409909 DMC1Q14565 340 aa18.59■□□□□ 0.57
LSM5-204ENST00000409909 Q6ZNB5 142 aa18.59■□□□□ 0.57
LSM5-204ENST00000409909 TADA2BQ86TJ2 420 aa18.59■□□□□ 0.57
LSM5-204ENST00000409909 RBBP8NLQ8NC74 664 aaPredicted RBP18.59■□□□□ 0.57
LSM5-204ENST00000409909 CNOT6LQ96LI5 555 aaKnown RBP18.59■□□□□ 0.57
LSM5-204ENST00000409909 HHIPQ96QV1 700 aa18.59■□□□□ 0.57
LSM5-204ENST00000409909 ARHGEF4Q9NR80 690 aa18.59■□□□□ 0.57
LSM5-204ENST00000409909 LMBRD1Q9NUN5 540 aa18.59■□□□□ 0.57
LSM5-204ENST00000409909 NCDNQ9UBB6 729 aa18.59■□□□□ 0.57
LSM5-204ENST00000409909 DNAH14Q0VDD8 3507 aa18.58■□□□□ 0.57
LSM5-204ENST00000409909 SDK1Q7Z5N4 2213 aa18.58■□□□□ 0.57
LSM5-204ENST00000409909 TRIM24O15164 1050 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 TULP3O75386 442 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 KLKB1P03952 638 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 BRD2P25440 801 aaKnown RBP18.58■□□□□ 0.56
LSM5-204ENST00000409909 GRIA2P42262 883 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 GOLGA8FQ08AF8 430 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 GOLGA8DPQ0D2H9 430 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 ADIGQ0VDE8 80 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 EFEMP1Q12805 493 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 CNGA2Q16280 664 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 ANO4Q32M45 955 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 EMC10Q5UCC4 262 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 PRR23BQ6ZRT6 265 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 CREBRFQ8IUR6 639 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 ARHGAP18Q8N392 663 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 CAMKK1Q8N5S9 505 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms