RNA–Protein interactions for RNA: ENST00000408580.1

RNU6ATAC40P-201, Transcript of RNA, U6atac small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6ATAC40P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC40P-201ENST00000408580 PSMD12O00232 456 aaPredicted RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 RGS13O14921 159 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 KMOO15229 486 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 AQP9O43315 295 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 GRIN3BO60391 1043 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 GCATO75600 419 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 BCAS2O75934 225 aaPredicted RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 RSL1D1O76021 490 aaKnown RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ZBTB11O95625 1053 aaPredicted RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 FOSP01100 380 aaPredicted RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 PROCP04070 461 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 P4HBP07237 508 aaKnown RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 LDHCP07864 332 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TRIM49P0CI25 452 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TRIM49CP0CI26 452 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 C7P10643 843 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 MCF2P10911 925 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 BMP3P12645 472 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 COX4I1P13073 169 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 KRT5P13647 590 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 YBX3P16989 372 aaKnown RBP eCLIP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ZNF26P17031 533 aaPredicted RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ADRA2BP18089 450 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 JAK1P23458 1154 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 GRK2P25098 689 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CNTFP26441 200 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TKTP29401 623 aaKnown RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 NMT1P30419 496 aaKnown RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 SSTR1P30872 391 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CIITAP33076 1130 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 RFC4P35249 363 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 GYG1P46976 350 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 RXRGP48443 463 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CDK8P49336 464 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 PCYT1AP49585 367 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 SERPINB9P50453 376 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 MXI1P50539 228 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 GPC3P51654 580 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 HK2P52789 917 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 SLC5A3P53794 718 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 GALNT2Q10471 571 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 GRSF1Q12849 480 aaKnown RBP eCLIP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 NFX1Q12986 1120 aaKnown RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 PPIL2Q13356 520 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 UBAP2LQ14157 1087 aaKnown RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TFDP1Q14186 410 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 FLOT2Q14254 428 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 RFTN1Q14699 578 aaPredicted RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ZNF846Q147U1 533 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 PSMD6Q15008 389 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 EFTUD2Q15029 972 aaKnown RBP eCLIP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 HERC3Q15034 1050 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 OXA1LQ15070 435 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 PHKG1Q16816 387 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ABCB5Q2M3G0 1257 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TRIM71Q2Q1W2 868 aaKnown RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TRIM16LQ309B1 348 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 Q3C1V9 767 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 LSM12Q3MHD2 195 aaKnown RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 MDH1BQ5I0G3 518 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 RALGPS1Q5JS13 557 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 HP1BP3Q5SSJ5 553 aaPredicted RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TEDDM1Q5T9Z0 273 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 FAXCQ5TGI0 409 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 AGAP7PQ5VUJ5 663 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 EGFLAMQ63HQ2 1017 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 PLA2G4FQ68DD2 849 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 PDPK2PQ6A1A2 396 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 SCARA3Q6AZY7 606 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 NANOGP8Q6NSW7 305 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ZNF746Q6NUN9 644 aaPredicted RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 RINT1Q6NUQ1 792 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 C16orf46Q6P387 395 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 C16orf87Q6PH81 154 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 USP17L2Q6R6M4 530 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 POTEGQ6S5H5 508 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 NSMFQ6X4W1 530 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 SPOCD1Q6ZMY3 1216 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 BNC2Q6ZN30 1099 aaPredicted RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 AGMOQ6ZNB7 445 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 GADL1Q6ZQY3 521 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 C1orf186Q6ZWK4 172 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 FASTKD5Q7L8L6 764 aaKnown RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 EEPD1Q7L9B9 569 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 USP17L1Q7RTZ2 530 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ZNF720Q7Z2F6 126 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 KRT27Q7Z3Y8 459 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 AMIGO2Q86SJ2 522 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 SLC26A11Q86WA9 606 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TTC30AQ86WT1 665 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CPNE8Q86YQ8 564 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 MCF2L2Q86YR7 1114 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 RHPN2Q8IUC4 686 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CLVS1Q8IUQ0 354 aaPredicted RBP3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ANKMY2Q8IV38 441 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 FAM178BQ8IXR5 827 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 PEX5LQ8IYB4 626 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 SEPT12Q8IYM1 358 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 OSCARQ8IYS5 282 aa3.19□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 DEFB107AQ8IZN7 70 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms