RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 CLEC20AQ6ZU45 233 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 CCDC117Q8IWD4 279 aaPredicted RBP13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 SIX6OS1Q8N1H7 587 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 PGBD3Q8N328 593 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 TRIML1Q8N9V2 468 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 ANKRD52Q8NB46 1076 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 SCAMP5Q8TAC9 235 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 PLEKHO2Q8TD55 490 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 JAKMIP2Q96AA8 810 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 FAM84AQ96KN4 292 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 NT5C1BQ96P26 610 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 HHIPQ96QV1 700 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 SMOQ99835 787 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 BBS2Q9BXC9 721 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 MARK1Q9P0L2 795 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 HELZP42694 1942 aaKnown RBP13.52□□□□□ -0.24
SNORD88B-201ENST00000408454 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 OTOL1A6NHN0 477 aaPredicted RBP13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 KHNYNO15037 678 aaKnown RBP13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 AP5Z1O43299 807 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 TIMM44O43615 452 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 CACNG3O60359 315 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 PAEPP09466 180 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 RARGP13631 454 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 NTSR1P30989 418 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 RDXP35241 583 aaKnown RBP13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 MPLP40238 635 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 OPRD1P41143 372 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 KIF11P52732 1056 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 SNX16P57768 344 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 ARID5AQ03989 594 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 PPP3CAQ08209 521 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 BST2Q10589 180 aaKnown RBP13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 SFSWAPQ12872 951 aaKnown RBP13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 MTA1Q13330 715 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 CUL2Q13617 745 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 CCDC142Q17RM4 750 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 LY6G5CQ5SRR4 150 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 RHBDF2Q6PJF5 856 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 CYP2U1Q7Z449 544 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 RASSF3Q86WH2 238 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 ZNF513Q8N8E2 541 aaPredicted RBP13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 TERB1Q8NA31 727 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 CEP76Q8TAP6 659 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 PLD4Q96BZ4 506 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 DDX50Q9BQ39 737 aaKnown RBP13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 SLC2A11Q9BYW1 496 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 LINC00597Q9H2U6 94 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 CCSER2Q9H7U1 834 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 DNAJC17Q9NVM6 304 aaKnown RBP13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 TMEM51Q9NW97 253 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 ZDHHC9Q9Y397 364 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 COQ4Q9Y3A0 265 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 STARD13Q9Y3M8 1113 aa13.52□□□□□ -0.25
SNORD88B-201ENST00000408454 PTPRDP23468 1912 aa13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 XPO1O14980 1071 aaKnown RBP13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 LATS1O95835 1130 aa13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 PRR29P0C7W0 189 aa13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 VDRP11473 427 aa13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 PRCPP42785 496 aa13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 DGKGP49619 791 aa13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 PNOCQ13519 176 aa13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 PLK5Q496M5 336 aa13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 C10orf76Q5T2E6 689 aa13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 ANO7Q6IWH7 933 aa13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 PAQR9Q6ZVX9 377 aa13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 ENOSF1Q7L5Y1 443 aa13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 C12orf29Q8N999 325 aa13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 NUSAP1Q9BXS6 441 aaKnown RBP13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 SDCBP2Q9H190 292 aa13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 ARRDC1-AS1Q9H2J1 176 aa13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 SUSD2Q9UGT4 822 aa13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 HBS1LQ9Y450 684 aaKnown RBP13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 GVINP1Q7Z2Y8 2422 aa13.51□□□□□ -0.25
SNORD88B-201ENST00000408454 NEDD8-MDP1E9PL57 170 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 K7EQS6 105 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 MED7O43513 233 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 TULP3O75386 442 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 FBXO21O94952 628 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 KLF8O95600 359 aaPredicted RBP13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 CAVIN2O95810 425 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 ZBED1O96006 694 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 IRF1P10914 325 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 CD19P15391 556 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 ATXN3P54252 364 aaPredicted RBP13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 ATXN1P54253 815 aaKnown RBP13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 CACNA2D1P54289 1103 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 SEC13P55735 322 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 CREB5Q02930 508 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 SYCP2LQ5T4T6 812 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 SPOPLQ6IQ16 392 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 TTC30AQ86WT1 665 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 BBS7Q8IWZ6 715 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 CHPFQ8IZ52 775 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 SCML4Q8N228 414 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 SPATA20Q8TB22 786 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 KLF16Q9BXK1 252 aaPredicted RBP13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 GOLPH3LQ9H4A5 285 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 FBRSQ9HAH7 460 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms