RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 AXIN1O15169 862 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 CCDC192P0DO97 292 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 CHRM1P11229 460 aaPredicted RBP20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 FMO5P49326 533 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 GAD2Q05329 585 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 MORC3Q14149 939 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 EMC10Q5UCC4 262 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 ARHGAP17Q68EM7 881 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 HTR3DQ70Z44 454 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 KBTBD6Q86V97 674 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 PHTF2Q8N3S3 785 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 NELFBQ8WX92 580 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 CEP63Q96MT8 703 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 ZDHHC4Q9NPG8 344 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 ARHGEF4Q9NR80 690 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 SPHK2Q9NRA0 654 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 DLL3Q9NYJ7 618 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 ABCA7Q8IZY2 2146 aa20.3■□□□□ 0.84
SMARCB1-204ENST00000407422 APBB3O95704 486 aa20.3■□□□□ 0.84
SMARCB1-204ENST00000407422 APODP05090 189 aa20.3■□□□□ 0.84
SMARCB1-204ENST00000407422 ANO4Q32M45 955 aa20.3■□□□□ 0.84
SMARCB1-204ENST00000407422 C10orf120Q5SQS8 335 aa20.3■□□□□ 0.84
SMARCB1-204ENST00000407422 PIGZQ86VD9 579 aa20.3■□□□□ 0.84
SMARCB1-204ENST00000407422 TTC30AQ86WT1 665 aa20.3■□□□□ 0.84
SMARCB1-204ENST00000407422 ETFBKMTQ8IXQ9 262 aa20.3■□□□□ 0.84
SMARCB1-204ENST00000407422 CCDC26Q8TAB7 109 aa20.3■□□□□ 0.84
SMARCB1-204ENST00000407422 FAM124BQ9H5Z6 455 aaPredicted RBP20.3■□□□□ 0.84
SMARCB1-204ENST00000407422 METTL14Q9HCE5 456 aaKnown RBP20.3■□□□□ 0.84
SMARCB1-204ENST00000407422 CTNND2Q9UQB3 1225 aa20.3■□□□□ 0.84
SMARCB1-204ENST00000407422 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.3■□□□□ 0.84
SMARCB1-204ENST00000407422 A0A0A0MRY4 1105 aa20.29■□□□□ 0.84
SMARCB1-204ENST00000407422 TULP2O00295 520 aa20.29■□□□□ 0.84
SMARCB1-204ENST00000407422 TRIM24O15164 1050 aa20.29■□□□□ 0.84
SMARCB1-204ENST00000407422 HOXC11O43248 304 aaPredicted RBP20.29■□□□□ 0.84
SMARCB1-204ENST00000407422 TIE1P35590 1138 aa20.29■□□□□ 0.84
SMARCB1-204ENST00000407422 CCDC40Q4G0X9 1142 aa20.29■□□□□ 0.84
SMARCB1-204ENST00000407422 KLHDC10Q6PID8 442 aa20.29■□□□□ 0.84
SMARCB1-204ENST00000407422 ERMP1Q7Z2K6 904 aa20.29■□□□□ 0.84
SMARCB1-204ENST00000407422 CACNA2D4Q7Z3S7 1137 aa20.29■□□□□ 0.84
SMARCB1-204ENST00000407422 ALLCQ8N6M5 410 aa20.29■□□□□ 0.84
SMARCB1-204ENST00000407422 ANKRD52Q8NB46 1076 aa20.29■□□□□ 0.84
SMARCB1-204ENST00000407422 SEMA4GQ9NTN9 838 aa20.29■□□□□ 0.84
SMARCB1-204ENST00000407422 EBF1Q9UH73 591 aa20.29■□□□□ 0.84
SMARCB1-204ENST00000407422 DNMT3LQ9UJW3 386 aa20.29■□□□□ 0.84
SMARCB1-204ENST00000407422 MMP17Q9ULZ9 603 aa20.29■□□□□ 0.84
SMARCB1-204ENST00000407422 DCLK1O15075 740 aa20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 TULP3O75386 442 aa20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 HNRNPLP14866 589 aaKnown RBP eCLIP20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 PPP1R2P41236 205 aa20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 GRIA2P42262 883 aa20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 KIR2DL1P43626 348 aaPredicted RBP20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 STX17P56962 302 aa20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 MRPS21P82921 87 aaKnown RBP20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 LMNB2Q03252 620 aa20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 PUM1Q14671 1186 aaKnown RBP eCLIP20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 GOLGA7BQ2TAP0 167 aa20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 RAB41Q5JT25 222 aa20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 BTBD8Q5XKL5 378 aa20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 MIB1Q86YT6 1006 aa20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 UBR7Q8N806 425 aa20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 IL17RCQ8NAC3 791 aa20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 TSTD1Q8NFU3 115 aa20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 UBXN6Q9BZV1 441 aa20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 TSPAN16Q9UKR8 245 aa20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 CIZ1Q9ULV3 898 aaPredicted RBP20.28■□□□□ 0.84
SMARCB1-204ENST00000407422 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.27■□□□□ 0.84
SMARCB1-204ENST00000407422 PLA2G4AP47712 749 aa20.27■□□□□ 0.84
SMARCB1-204ENST00000407422 PSEN1P49768 467 aa20.27■□□□□ 0.84
SMARCB1-204ENST00000407422 DGKEP52429 567 aa20.27■□□□□ 0.84
SMARCB1-204ENST00000407422 TMEM92Q6UXU6 159 aa20.27■□□□□ 0.84
SMARCB1-204ENST00000407422 TPGS1Q6ZTW0 290 aa20.27■□□□□ 0.84
SMARCB1-204ENST00000407422 TXNDC5Q8NBS9 432 aaKnown RBP20.27■□□□□ 0.84
SMARCB1-204ENST00000407422 NDRG1Q92597 394 aaKnown RBP20.27■□□□□ 0.84
SMARCB1-204ENST00000407422 CLIC5Q9NZA1 410 aa20.27■□□□□ 0.84
SMARCB1-204ENST00000407422 TBC1D3BA6NDS4 549 aa20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 SGK1O00141 431 aa20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 LRP3O75074 770 aa20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 KLF8O95600 359 aaPredicted RBP20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 CD19P15391 556 aa20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 PDE4CQ08493 712 aa20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 GOLGA8FQ08AF8 430 aa20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 GOLGA8DPQ0D2H9 430 aa20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 CCDC6Q16204 474 aa20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 CRY1Q16526 586 aa20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 SGO2Q562F6 1265 aa20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 ANO7Q6IWH7 933 aa20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 DGLUCYQ7Z3D6 616 aa20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 ZNF276Q8N554 614 aa20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 KAT5Q92993 513 aa20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 TPSD1Q9BZJ3 242 aa20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 ARRDC1-AS1Q9H2J1 176 aa20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 DEC1Q9P2X7 70 aa20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 LSM7Q9UK45 103 aaKnown RBP20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 INVSQ9Y283 1065 aa20.27■□□□□ 0.83
SMARCB1-204ENST00000407422 NEDD8-MDP1E9PL57 170 aa20.26■□□□□ 0.83
SMARCB1-204ENST00000407422 STC2O76061 302 aa20.26■□□□□ 0.83
SMARCB1-204ENST00000407422 RALAP11233 206 aa20.26■□□□□ 0.83
SMARCB1-204ENST00000407422 TBXAS1P24557 533 aaPredicted RBP20.26■□□□□ 0.83
SMARCB1-204ENST00000407422 TNFRSF4P43489 277 aa20.26■□□□□ 0.83
SMARCB1-204ENST00000407422 TKTL1P51854 596 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms