RNA–Protein interactions for RNA: ENST00000406477.7

PARVB-204, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-204ENST00000406477 AAASQ9NRG9 546 aa16.89■□□□□ 0.29
PARVB-204ENST00000406477 CACNG4Q9UBN1 327 aa16.89■□□□□ 0.29
PARVB-204ENST00000406477 TIMM13Q9Y5L4 95 aaPredicted RBP16.89■□□□□ 0.29
PARVB-204ENST00000406477 TMEM189-UBE2V1I3L0A0 370 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 DNM1LO00429 736 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 IFNB1P01574 187 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 RBP3P10745 1247 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 NR1D1P20393 614 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 IBSPP21815 317 aaPredicted RBP16.88■□□□□ 0.29
PARVB-204ENST00000406477 ACTN2P35609 894 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 BCAR1P56945 870 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 KCTD19Q17RG1 926 aaPredicted RBP16.88■□□□□ 0.29
PARVB-204ENST00000406477 NOMO2Q5JPE7 1267 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 RAB41Q5JT25 222 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 OVOS1Q6IE37 1185 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 C4orf22Q6V702 233 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 BZW1Q7L1Q6 419 aaKnown RBP16.88■□□□□ 0.29
PARVB-204ENST00000406477 IRGQQ8WZA9 623 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 NT5C3BQ969T7 300 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 PGM2Q96G03 612 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 TTC25Q96NG3 672 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 SLC9A7Q96T83 725 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 SMOQ99835 787 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 PAAF1Q9BRP4 392 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 PNPLA8Q9NP80 782 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 AP4E1Q9UPM8 1137 aa16.88■□□□□ 0.29
PARVB-204ENST00000406477 TRAPPC3O43617 180 aa16.87■□□□□ 0.29
PARVB-204ENST00000406477 ZNF189O75820 626 aaPredicted RBP16.87■□□□□ 0.29
PARVB-204ENST00000406477 BEST1O76090 585 aa16.87■□□□□ 0.29
PARVB-204ENST00000406477 TTC4O95801 387 aa16.87■□□□□ 0.29
PARVB-204ENST00000406477 CAPN2P17655 700 aa16.87■□□□□ 0.29
PARVB-204ENST00000406477 L1CAMP32004 1257 aa16.87■□□□□ 0.29
PARVB-204ENST00000406477 ARL4AP40617 200 aa16.87■□□□□ 0.29
PARVB-204ENST00000406477 BRCC3P46736 316 aa16.87■□□□□ 0.29
PARVB-204ENST00000406477 NR2C2P49116 596 aa16.87■□□□□ 0.29
PARVB-204ENST00000406477 CDK7P50613 346 aa16.87■□□□□ 0.29
PARVB-204ENST00000406477 DAOAP59103 153 aa16.87■□□□□ 0.29
PARVB-204ENST00000406477 MMRN1Q13201 1228 aa16.87■□□□□ 0.29
PARVB-204ENST00000406477 KCTD16Q68DU8 428 aa16.87■□□□□ 0.29
PARVB-204ENST00000406477 DARS2Q6PI48 645 aaKnown RBP16.87■□□□□ 0.29
PARVB-204ENST00000406477 CD300LGQ6UXG3 332 aa16.87■□□□□ 0.29
PARVB-204ENST00000406477 RTN4RL1Q86UN2 441 aaPredicted RBP16.87■□□□□ 0.29
PARVB-204ENST00000406477 MYLPFQ96A32 169 aa16.87■□□□□ 0.29
PARVB-204ENST00000406477 FAM193BQ96PV7 902 aaPredicted RBP16.87■□□□□ 0.29
PARVB-204ENST00000406477 NPY6RQ99463 290 aa16.87■□□□□ 0.29
PARVB-204ENST00000406477 CCDC77Q9BR77 488 aa16.87■□□□□ 0.29
PARVB-204ENST00000406477 DHX35Q9H5Z1 703 aaKnown RBP16.87■□□□□ 0.29
PARVB-204ENST00000406477 TMEM161AQ9NX61 479 aa16.87■□□□□ 0.29
PARVB-204ENST00000406477 TDRD15B5MCY1 1934 aaKnown RBP16.86■□□□□ 0.29
PARVB-204ENST00000406477 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.86■□□□□ 0.29
PARVB-204ENST00000406477 H7C0C1 242 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 CAPN9O14815 690 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 IVLP07476 585 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 IL4RP24394 825 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 IGFBP6P24592 240 aaPredicted RBP16.86■□□□□ 0.29
PARVB-204ENST00000406477 CHKAP35790 457 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 ATP5OP48047 213 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 DSC1Q08554 894 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 XRCC4Q13426 336 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 RAB6CQ53S08 254 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 DCAF6Q58WW2 860 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 ZC3H12AQ5D1E8 599 aaKnown RBP16.86■□□□□ 0.29
PARVB-204ENST00000406477 RNASEH2BQ5TBB1 312 aaKnown RBP16.86■□□□□ 0.29
PARVB-204ENST00000406477 LEKR1Q6ZMV7 388 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 C4orf50Q6ZRC1 276 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 BNIPLQ7Z465 357 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 CDKL3Q8IVW4 592 aaPredicted RBP16.86■□□□□ 0.29
PARVB-204ENST00000406477 PPIL6Q8IXY8 311 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 PLD5Q8N7P1 536 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 APBB2Q92870 758 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 RTP3Q9BQQ7 232 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 CAPS2Q9BXY5 557 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 ULBP1Q9BZM6 244 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 RAB6CQ9H0N0 254 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 ADAM7Q9H2U9 754 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 DMAP1Q9NPF5 467 aaPredicted RBP16.86■□□□□ 0.29
PARVB-204ENST00000406477 TMEM51Q9NW97 253 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 BCCIPQ9P287 314 aaKnown RBP eCLIP16.86■□□□□ 0.29
PARVB-204ENST00000406477 FZD10Q9ULW2 581 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 TRIM17Q9Y577 477 aa16.86■□□□□ 0.29
PARVB-204ENST00000406477 EIF3HO15372 352 aaKnown RBP eCLIP16.85■□□□□ 0.29
PARVB-204ENST00000406477 SHOX2O60902 331 aaPredicted RBP16.85■□□□□ 0.29
PARVB-204ENST00000406477 F9P00740 461 aa16.85■□□□□ 0.29
PARVB-204ENST00000406477 ZSCAN5DPP0CG00 497 aa16.85■□□□□ 0.29
PARVB-204ENST00000406477 PECAM1P16284 738 aaPredicted RBP16.85■□□□□ 0.29
PARVB-204ENST00000406477 CYP2F1P24903 491 aa16.85■□□□□ 0.29
PARVB-204ENST00000406477 ATP5DP30049 168 aa16.85■□□□□ 0.29
PARVB-204ENST00000406477 DEUP1Q05D60 604 aa16.85■□□□□ 0.29
PARVB-204ENST00000406477 MBTPS1Q14703 1052 aa16.85■□□□□ 0.29
PARVB-204ENST00000406477 CENPUQ71F23 418 aa16.85■□□□□ 0.29
PARVB-204ENST00000406477 PQLC3Q8N755 202 aa16.85■□□□□ 0.29
PARVB-204ENST00000406477 PCDH19Q8TAB3 1148 aa16.85■□□□□ 0.29
PARVB-204ENST00000406477 NRDE2Q9H7Z3 1164 aa16.85■□□□□ 0.29
PARVB-204ENST00000406477 GPATCH2LQ9NWQ4 482 aa16.85■□□□□ 0.29
PARVB-204ENST00000406477 SAE1Q9UBE0 346 aaPredicted RBP16.85■□□□□ 0.29
PARVB-204ENST00000406477 BCLAF3A2AJT9 711 aaKnown RBP16.85■□□□□ 0.29
PARVB-204ENST00000406477 H3BRJ5 948 aa16.85■□□□□ 0.29
PARVB-204ENST00000406477 PITPNM1O00562 1244 aa16.85■□□□□ 0.29
PARVB-204ENST00000406477 RASGRF2O14827 1237 aa16.85■□□□□ 0.29
PARVB-204ENST00000406477 RGS16O15492 202 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms