RNA–Protein interactions for RNA: ENST00000405356.5

NOLC1-202, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best) BASIC

Gene NOLC1, Length 3,967 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-202ENST00000405356 COG5Q9UP83 839 aa8.98□□□□□ -0.97
NOLC1-202ENST00000405356 SMNDC1O75940 238 aaKnown RBP eCLIP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 STK10O94804 968 aaKnown RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 RABGGTBP53611 331 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 COPS2P61201 443 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 BASP1P80723 227 aaKnown RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 CENPCQ03188 943 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 DEUP1Q05D60 604 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 HIC1Q14526 733 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 TRIM60Q495X7 471 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 SLC39A12Q504Y0 691 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 EFHC1Q5JVL4 640 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 PIGWQ7Z7B1 504 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 LONP2Q86WA8 852 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 FAM131BQ86XD5 332 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 ECHDC2Q86YB7 292 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 MAB21L3Q8N8X9 362 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 FAM172AQ8WUF8 416 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 CPXM1Q96SM3 734 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 ERP44Q9BS26 406 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 B3GNT5Q9BYG0 378 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 EPB41L4BQ9H329 900 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 PABPC3Q9H361 631 aaKnown RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 AVENQ9NQS1 362 aaPredicted RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 DDX56Q9NY93 547 aaKnown RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 USP15Q9Y4E8 981 aaPredicted RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 PTPRFP10586 1907 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 NCANO14594 1321 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 TMEM120BA0PK00 339 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 SRRM3A6NNA2 597 aaPredicted RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 M0QYT0 321 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 O00370 1275 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 SNX3O60493 162 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 ZBED1O96006 694 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 CYP1A2P05177 515 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 OR4Q2P0C623 313 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 TUBP50607 506 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 C15orf59Q2T9L4 293 aaPredicted RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 ATP13A4Q4VNC1 1196 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 DCAF12L1Q5VU92 463 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 SCARA3Q6AZY7 606 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 C11orf63Q6NUN7 778 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 C15orf39Q6ZRI6 1047 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 CTU1Q7Z7A3 348 aaKnown RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 PIGZQ86VD9 579 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 CPNE8Q86YQ8 564 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 CCDC33Q8N5R6 958 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 FITM2Q8N6M3 262 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 ADAM32Q8TC27 787 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 VCPIP1Q96JH7 1222 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 PWWP2AQ96N64 755 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 TSEN34Q9BSV6 310 aaKnown RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 GPR88Q9GZN0 384 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 SLITRK6Q9H5Y7 841 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 CST8O60676 142 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 SUN1O94901 812 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 LINGO3P0C6S8 592 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 SETSIPP0DME0 302 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 PYGMP11217 842 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 MMP13P45452 471 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 RPL21P46778 160 aaKnown RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 SOX4Q06945 474 aaPredicted RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 ENPEPQ07075 957 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 TFDP2Q14188 446 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 PPP2R5DQ14738 602 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 EFHC2Q5JST6 749 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 ZNF280DQ6N043 979 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 CASC4Q6P4E1 433 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 FAM183BPQ6ZVS7 135 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 OTOP2Q7RTS6 562 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 NECAB2Q7Z6G3 386 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 SLC13A5Q86YT5 568 aaPredicted RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 SMG8Q8ND04 991 aaKnown RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 JOSD2Q8TAC2 188 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 DPF3Q92784 378 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 P3H4Q92791 437 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 XYLT2Q9H1B5 865 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 DSEQ9UL01 958 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 IKBKGQ9Y6K9 419 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 PLXNB2O15031 1838 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 DPPA5A6NC42 116 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 CFAP73A6NFT4 308 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 PPFIA2O75334 1257 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 EIF3BP55884 814 aaKnown RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 ZNF268Q14587 947 aaPredicted RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 ITIH4Q14624 930 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 MAPRE1Q15691 268 aaKnown RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 SOWAHAQ2M3V2 549 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 SDHAF4Q5VUM1 108 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 PPP1R21Q6ZMI0 780 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 VSIG1Q86XK7 387 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 PHF13Q86YI8 300 aaPredicted RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 RCOR2Q8IZ40 523 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 ARHGEF2Q92974 986 aaKnown RBP8.97□□□□□ -0.97
NOLC1-202ENST00000405356 SH3GL3Q99963 347 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 ULBP1Q9BZM6 244 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 DDIT4Q9NX09 232 aa8.97□□□□□ -0.97
NOLC1-202ENST00000405356 TJP2Q9UDY2 1190 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms