RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 IFT80Q9P2H3 777 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 KCND3Q9UK17 655 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 CCNL1Q9UK58 526 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 CA14Q9ULX7 337 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 TESMINQ9Y4I5 508 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 PCDHB2Q9Y5E7 798 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 M0QZQ0 153 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 EYA2O00167 538 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 SLC16A3O15427 465 aaKnown RBP4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 SPRY2O43597 315 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 EGR2P11161 476 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 CST5P28325 142 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 MCM5P33992 734 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 EIF4A1P60842 406 aaKnown RBP4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 E2F1Q01094 437 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 ITIH3Q06033 890 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 FSTL1Q12841 308 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 RPS6KA2Q15349 733 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 TXNRD1Q16881 649 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 TRIM71Q2Q1W2 868 aaKnown RBP4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 ATPAF1Q5TC12 328 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 FNDC7Q5VTL7 733 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 IGFL4Q6B9Z1 124 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 MMS22LQ6ZRQ5 1243 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 PIK3AP1Q6ZUJ8 805 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 SYT13Q7L8C5 426 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 RASGRP2Q7LDG7 609 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 DTX2Q86UW9 622 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 P3H2Q8IVL5 708 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 CPOQ8IVL8 374 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 ARHGEF19Q8IW93 802 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 NRSN1Q8IZ57 195 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 LNX2Q8N448 690 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 SH3RF3Q8TEJ3 882 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 SLC22A17Q8WUG5 538 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 HMGB4Q8WW32 186 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 SOCS4Q8WXH5 440 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 GOLGA1Q92805 767 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 COG8Q96MW5 612 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 NAP1L4Q99733 375 aaKnown RBP4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 DDX23Q9BUQ8 820 aaKnown RBP4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 SERHL2Q9H4I8 314 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 SAYSD1Q9NPB0 183 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 FZD1Q9UP38 647 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 CNTN6Q9UQ52 1028 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 TSC22D4Q9Y3Q8 395 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 LRRFIP2Q9Y608 721 aaKnown RBP4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 COL15A1P39059 1388 aa4.47□□□□□ -1.69
HMGB1P17-201ENST00000403495 FAM155BO75949 473 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 PDE8BO95263 885 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 CYP21A2P08686 494 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 TMEM225BP0DP42 221 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 ENGP17813 658 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 CD53P19397 219 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 ITPKBP27987 946 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 PCSK6P29122 969 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 CTGFP29279 349 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 FAM3BP58499 235 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 RNASELQ05823 741 aaKnown RBP4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 SF3A3Q12874 501 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 TUBA3CQ13748 450 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 ACOX1Q15067 660 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 GALNTL6Q49A17 601 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 LRRC24Q50LG9 513 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 ANKRD45Q5TZF3 282 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 CCDC70Q6NSX1 233 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 TUBA3EQ6PEY2 450 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 RHOUQ7L0Q8 258 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 MRGPREQ86SM8 312 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 HEATR4Q86WZ0 1026 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 HERC6Q8IVU3 1022 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 LRRC71Q8N4P6 559 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 SIMC1Q8NDZ2 872 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 HAS1Q92839 578 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 RFKQ969G6 155 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 FUBP1Q96AE4 644 aaKnown RBP4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 CDK5RAP1Q96SZ6 601 aaKnown RBP4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 CHODLQ9H9P2 273 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 RIC8AQ9NPQ8 531 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 STEAP1Q9UHE8 339 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 RAB21Q9UL25 225 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 VPS4AQ9UN37 437 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 ST3GAL5Q9UNP4 418 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 CRYL1Q9Y2S2 319 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 SALL3Q9BXA9 1300 aa4.46□□□□□ -1.7
HMGB1P17-201ENST00000403495 PIPSLA2A3N6 862 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 E7EVH7 732 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 PROM1O43490 865 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 PEX1O43933 1283 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 PMPCBO75439 489 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 ELFN1P0C7U0 828 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 ZFXP17010 805 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 FPR3P25089 353 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 THBS4P35443 961 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 ZEB1P37275 1124 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 PLA2G5P39877 138 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 GSTM5P46439 218 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 NXPH1P58417 271 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 PSG6Q00889 435 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 CSHL1Q14406 222 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms