RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 PIBF1Q8WXW3 757 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 CCDC138Q96M89 665 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 SLC2A13Q96QE2 648 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 NRSN2Q9GZP1 204 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 RPF1Q9H9Y2 349 aaKnown RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 CYP3A43Q9HB55 503 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 WDR6Q9NNW5 1121 aaKnown RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 SLC2A4RGQ9NR83 387 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 BLOC1S4Q9NUP1 217 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 FBXW11Q9UKB1 542 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 CPSF3Q9UKF6 684 aaKnown RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 INVSQ9Y283 1065 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 PDE4DIPQ5VU43 2346 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 TTC26A0AVF1 554 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 C2orf71A6NGG8 1288 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 ARL5CA6NH57 179 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 LRRC10BA6NIK2 292 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 LRRIQ4A6NIV6 560 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 PRR33A8MZF0 331 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 H3BRJ5 948 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 INO80B-WBP1J3KQ70 363 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 TBC1D4O60343 1298 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 USO1O60763 962 aaKnown RBP4.03□□□□□ -1.76
UBE3A-202ENST00000397954 PAPSS2O95340 614 aaPredicted RBP4.03□□□□□ -1.76
UBE3A-202ENST00000397954 VTNP04004 478 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 ITGB1P05556 798 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 PYGLP06737 847 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 SRGAP2CP0DJJ0 459 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 MARCKSP29966 332 aaPredicted RBP4.03□□□□□ -1.76
UBE3A-202ENST00000397954 SLC19A1P41440 591 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 CASP2P42575 452 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 PRKCQQ04759 706 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 MYO1EQ12965 1108 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 CTTNQ14247 550 aaKnown RBP4.03□□□□□ -1.76
UBE3A-202ENST00000397954 PSMD6Q15008 389 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 PTPN14Q15678 1187 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 NAB2Q15742 525 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 ZNF568Q3ZCX4 644 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 EARS2Q5JPH6 523 aaKnown RBP4.03□□□□□ -1.76
UBE3A-202ENST00000397954 PPM1JQ5JR12 505 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 TMEM63BQ5T3F8 832 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 GTF2IRD2BQ6EKJ0 949 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.03□□□□□ -1.76
UBE3A-202ENST00000397954 ENOSF1Q7L5Y1 443 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 OVCH2Q7RTZ1 564 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 GPR155Q7Z3F1 870 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 HAUS6Q7Z4H7 955 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 GPR149Q86SP6 731 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 GTF2IRD2Q86UP8 949 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 UNC93AQ86WB7 457 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 TRIM59Q8IWR1 403 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 THEM5Q8N1Q8 247 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 GPD1LQ8N335 351 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 PDZD8Q8NEN9 1154 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 SYAP1Q96A49 352 aaPredicted RBP4.03□□□□□ -1.76
UBE3A-202ENST00000397954 SPATA17Q96L03 361 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 DHRS1Q96LJ7 313 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 NLRP4Q96MN2 994 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 NELL2Q99435 816 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 TTPALQ9BTX7 342 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 KRTAP3-3Q9BYR6 98 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 KRTAP3-2Q9BYR7 98 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 CGGBP1Q9UFW8 167 aaPredicted RBP4.03□□□□□ -1.76
UBE3A-202ENST00000397954 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.03□□□□□ -1.76
UBE3A-202ENST00000397954 AFF4Q9UHB7 1163 aaKnown RBP4.03□□□□□ -1.76
UBE3A-202ENST00000397954 KIAA1257Q9ULG3 409 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 EMC9Q9Y3B6 208 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 C2orf16Q68DN1 1984 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 MIA3Q5JRA6 1907 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 VWA3AA6NCI4 1184 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 TTLL8A6PVC2 850 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 MBTPS2O43462 519 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 MGEA5O60502 916 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 ECI2O75521 394 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 LETM1O95202 739 aaPredicted RBP4.03□□□□□ -1.76
UBE3A-202ENST00000397954 CD247P20963 164 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 PCSK1P29120 753 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 ECI1P42126 302 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 TUFMP49411 452 aaKnown RBP4.03□□□□□ -1.76
UBE3A-202ENST00000397954 ZNF200P98182 395 aaPredicted RBP4.03□□□□□ -1.76
UBE3A-202ENST00000397954 AMPD2Q01433 879 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 RNASELQ05823 741 aaKnown RBP4.03□□□□□ -1.76
UBE3A-202ENST00000397954 PPP2R5DQ14738 602 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 UPP1Q16831 310 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 C1QTNF12Q5T7M4 302 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 MCTP1Q6DN14 999 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 INTS8Q75QN2 995 aaKnown RBP4.03□□□□□ -1.76
UBE3A-202ENST00000397954 TADA2BQ86TJ2 420 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 CCDC150Q8NCX0 1101 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 SPATA20Q8TB22 786 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 DNAJC19Q96DA6 116 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 DHTKD1Q96HY7 919 aaPredicted RBP4.03□□□□□ -1.76
UBE3A-202ENST00000397954 ANKRD36BP1Q96IX9 119 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 TSG101Q99816 390 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 TRIM9Q9C026 710 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 MKRN2Q9H000 416 aaKnown RBP4.03□□□□□ -1.76
UBE3A-202ENST00000397954 CDT1Q9H211 546 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 NRDE2Q9H7Z3 1164 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 VPS45Q9NRW7 570 aa4.03□□□□□ -1.76
UBE3A-202ENST00000397954 DNAJB12Q9NXW2 375 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms