RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 FAM163BP0C2L3 166 aa17.08■□□□□ 0.32
CUX2-202ENST00000397643 ZDHHC11BP0C7U3 371 aa17.08■□□□□ 0.32
CUX2-202ENST00000397643 NASPP49321 788 aaPredicted RBP17.08■□□□□ 0.32
CUX2-202ENST00000397643 TUBP50607 506 aa17.08■□□□□ 0.32
CUX2-202ENST00000397643 STK38Q15208 465 aa17.08■□□□□ 0.32
CUX2-202ENST00000397643 HECTD3Q5T447 861 aa17.08■□□□□ 0.32
CUX2-202ENST00000397643 BTBD8Q5XKL5 378 aa17.08■□□□□ 0.32
CUX2-202ENST00000397643 IPO4Q8TEX9 1081 aaKnown RBP17.08■□□□□ 0.32
CUX2-202ENST00000397643 HPS3Q969F9 1004 aa17.08■□□□□ 0.32
CUX2-202ENST00000397643 ZNF419Q96HQ0 510 aaPredicted RBP17.08■□□□□ 0.32
CUX2-202ENST00000397643 KCNK16Q96T55 309 aa17.08■□□□□ 0.32
CUX2-202ENST00000397643 GABRG3Q99928 467 aa17.08■□□□□ 0.32
CUX2-202ENST00000397643 TRIM9Q9C026 710 aa17.08■□□□□ 0.32
CUX2-202ENST00000397643 XYLT2Q9H1B5 865 aa17.08■□□□□ 0.32
CUX2-202ENST00000397643 CHORDC1Q9UHD1 332 aaPredicted RBP17.08■□□□□ 0.32
CUX2-202ENST00000397643 SH3BP1Q9Y3L3 701 aa17.08■□□□□ 0.32
CUX2-202ENST00000397643 ZNF217O75362 1048 aa17.07■□□□□ 0.32
CUX2-202ENST00000397643 YEATS4O95619 227 aa17.07■□□□□ 0.32
CUX2-202ENST00000397643 RDXP35241 583 aaKnown RBP17.07■□□□□ 0.32
CUX2-202ENST00000397643 PGFP49763 221 aa17.07■□□□□ 0.32
CUX2-202ENST00000397643 SLC5A3P53794 718 aa17.07■□□□□ 0.32
CUX2-202ENST00000397643 SLC14A1Q13336 389 aa17.07■□□□□ 0.32
CUX2-202ENST00000397643 SLC39A14Q15043 492 aa17.07■□□□□ 0.32
CUX2-202ENST00000397643 TRIP6Q15654 476 aaKnown RBP17.07■□□□□ 0.32
CUX2-202ENST00000397643 ANO4Q32M45 955 aa17.07■□□□□ 0.32
CUX2-202ENST00000397643 WDR72Q3MJ13 1102 aa17.07■□□□□ 0.32
CUX2-202ENST00000397643 PAQR9Q6ZVX9 377 aa17.07■□□□□ 0.32
CUX2-202ENST00000397643 FAM35AQ86V20 835 aa17.07■□□□□ 0.32
CUX2-202ENST00000397643 ERLEC1Q96DZ1 483 aa17.07■□□□□ 0.32
CUX2-202ENST00000397643 SLC6A17Q9H1V8 727 aa17.07■□□□□ 0.32
CUX2-202ENST00000397643 GMIPQ9P107 970 aa17.07■□□□□ 0.32
CUX2-202ENST00000397643 A8MXQ7 604 aa17.06■□□□□ 0.32
CUX2-202ENST00000397643 PRRT4C9JH25 899 aa17.06■□□□□ 0.32
CUX2-202ENST00000397643 CACNG3O60359 315 aa17.06■□□□□ 0.32
CUX2-202ENST00000397643 STAU1O95793 577 aaKnown RBP17.06■□□□□ 0.32
CUX2-202ENST00000397643 SYPP08247 313 aa17.06■□□□□ 0.32
CUX2-202ENST00000397643 FTH1P19P0C7X4 201 aa17.06■□□□□ 0.32
CUX2-202ENST00000397643 DLATP10515 647 aaKnown RBP17.06■□□□□ 0.32
CUX2-202ENST00000397643 TXLNAP40222 546 aa17.06■□□□□ 0.32
CUX2-202ENST00000397643 STAT6P42226 847 aa17.06■□□□□ 0.32
CUX2-202ENST00000397643 TNNC1P63316 161 aa17.06■□□□□ 0.32
CUX2-202ENST00000397643 SNRNP35Q16560 246 aaKnown RBP17.06■□□□□ 0.32
CUX2-202ENST00000397643 PREPLQ4J6C6 727 aaPredicted RBP17.06■□□□□ 0.32
CUX2-202ENST00000397643 SOWAHCQ53LP3 525 aaPredicted RBP17.06■□□□□ 0.32
CUX2-202ENST00000397643 C19orf48Q6RUI8 117 aa17.06■□□□□ 0.32
CUX2-202ENST00000397643 CCNI2Q6ZMN8 369 aaPredicted RBP17.06■□□□□ 0.32
CUX2-202ENST00000397643 CCDC73Q6ZRK6 1079 aa17.06■□□□□ 0.32
CUX2-202ENST00000397643 TOGARAM2Q6ZUX3 1019 aa17.06■□□□□ 0.32
CUX2-202ENST00000397643 NAXDQ8IW45 347 aa17.06■□□□□ 0.32
CUX2-202ENST00000397643 CHPFQ8IZ52 775 aa17.06■□□□□ 0.32
CUX2-202ENST00000397643 LINC00301Q8NCQ3 95 aa17.06■□□□□ 0.32
CUX2-202ENST00000397643 MRGPRX1Q96LB2 322 aa17.06■□□□□ 0.32
CUX2-202ENST00000397643 CGRRF1Q99675 332 aa17.06■□□□□ 0.32
CUX2-202ENST00000397643 SCAND2PQ9GZW5 306 aaPredicted RBP17.06■□□□□ 0.32
CUX2-202ENST00000397643 DNAJC17Q9NVM6 304 aaKnown RBP17.06■□□□□ 0.32
CUX2-202ENST00000397643 MORC2Q9Y6X9 1032 aaPredicted RBP17.06■□□□□ 0.32
CUX2-202ENST00000397643 SPTLC2O15270 562 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 TGFB1I1O43294 461 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 CBFA2T3O75081 653 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 IRF1P10914 325 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 MYL6P60660 151 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 CYP24A1Q07973 514 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 GRIK2Q13002 908 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 PSMD6Q15008 389 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 PLEKHG6Q3KR16 790 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 GRAMD4Q6IC98 578 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 EPM2AIP1Q7L775 607 aaPredicted RBP17.05■□□□□ 0.32
CUX2-202ENST00000397643 PDZD3Q86UT5 571 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 PNPLA1Q8N8W4 532 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 ZMIZ2Q8NF64 920 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 ZNF516Q92618 1163 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 P2RY11Q96G91 374 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 PANK2Q9BZ23 570 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 SMYD3Q9H7B4 428 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 KIAA1586Q9HCI6 787 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 AGPAT3Q9NRZ7 376 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 MARK1Q9P0L2 795 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 RCOR1Q9UKL0 485 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 RAD54BQ9Y620 910 aa17.05■□□□□ 0.32
CUX2-202ENST00000397643 PTPRBP23467 1997 aa17.04■□□□□ 0.32
CUX2-202ENST00000397643 NEDD8-MDP1E9PL57 170 aa17.04■□□□□ 0.32
CUX2-202ENST00000397643 PPP6R2O75170 966 aa17.04■□□□□ 0.32
CUX2-202ENST00000397643 TNNI1P19237 187 aa17.04■□□□□ 0.32
CUX2-202ENST00000397643 COL28A1Q2UY09 1125 aa17.04■□□□□ 0.32
CUX2-202ENST00000397643 NUDT18Q6ZVK8 323 aa17.04■□□□□ 0.32
CUX2-202ENST00000397643 HTR3DQ70Z44 454 aa17.04■□□□□ 0.32
CUX2-202ENST00000397643 CCDC65Q8IXS2 484 aa17.04■□□□□ 0.32
CUX2-202ENST00000397643 FUKQ8N0W3 1084 aa17.04■□□□□ 0.32
CUX2-202ENST00000397643 RDH13Q8NBN7 331 aa17.04■□□□□ 0.32
CUX2-202ENST00000397643 SPATA32Q96LK8 384 aa17.04■□□□□ 0.32
CUX2-202ENST00000397643 FAM124BQ9H5Z6 455 aaPredicted RBP17.04■□□□□ 0.32
CUX2-202ENST00000397643 DMAP1Q9NPF5 467 aaPredicted RBP17.04■□□□□ 0.32
CUX2-202ENST00000397643 CACNA2D2Q9NY47 1150 aa17.04■□□□□ 0.32
CUX2-202ENST00000397643 NXF1Q9UBU9 619 aaKnown RBP17.04■□□□□ 0.32
CUX2-202ENST00000397643 SUSD2Q9UGT4 822 aa17.04■□□□□ 0.32
CUX2-202ENST00000397643 EIF3DO15371 548 aaKnown RBP eCLIP17.03■□□□□ 0.32
CUX2-202ENST00000397643 TLR5O60602 858 aa17.03■□□□□ 0.32
CUX2-202ENST00000397643 TBX18O95935 607 aa17.03■□□□□ 0.32
CUX2-202ENST00000397643 CISD3P0C7P0 127 aa17.03■□□□□ 0.32
CUX2-202ENST00000397643 TYRP14679 529 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms