RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 ASRGL1Q7L266 308 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 NT5DC4Q86YG4 428 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 MAP7D3Q8IWC1 876 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 DENND1AQ8TEH3 1009 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 DNAJB3Q8WWF6 145 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 ARL2BPQ9Y2Y0 163 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 PLXNA1Q9UIW2 1896 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 STAU1O95793 577 aaKnown RBP24.72■■□□□ 1.55
PABPN1-202ENST00000397276 SMIM10L2AP0DMW4 78 aa24.72■■□□□ 1.55
PABPN1-202ENST00000397276 SMIM10L2BP0DMW5 78 aa24.72■■□□□ 1.55
PABPN1-202ENST00000397276 CCND1P24385 295 aa24.72■■□□□ 1.55
PABPN1-202ENST00000397276 STIP1P31948 543 aaKnown RBP24.72■■□□□ 1.55
PABPN1-202ENST00000397276 SPARCL1Q14515 664 aa24.72■■□□□ 1.55
PABPN1-202ENST00000397276 PKDCCQ504Y2 493 aa24.72■■□□□ 1.55
PABPN1-202ENST00000397276 BEST2Q8NFU1 509 aa24.72■■□□□ 1.55
PABPN1-202ENST00000397276 ZMYND8Q9ULU4 1186 aaPredicted RBP24.72■■□□□ 1.55
PABPN1-202ENST00000397276 CITO14578 2027 aa24.72■■□□□ 1.55
PABPN1-202ENST00000397276 KAT6AQ92794 2004 aa24.72■■□□□ 1.55
PABPN1-202ENST00000397276 CYP2C9P11712 490 aa24.72■■□□□ 1.55
PABPN1-202ENST00000397276 GCKP35557 465 aa24.72■■□□□ 1.55
PABPN1-202ENST00000397276 ZNF200P98182 395 aaPredicted RBP24.72■■□□□ 1.55
PABPN1-202ENST00000397276 HIC1Q14526 733 aa24.72■■□□□ 1.55
PABPN1-202ENST00000397276 PQLC3Q8N755 202 aa24.72■■□□□ 1.55
PABPN1-202ENST00000397276 PCDH19Q8TAB3 1148 aa24.72■■□□□ 1.55
PABPN1-202ENST00000397276 UPF1Q92900 1129 aaKnown RBP eCLIP24.72■■□□□ 1.55
PABPN1-202ENST00000397276 UTP4Q969X6 686 aaKnown RBP24.72■■□□□ 1.55
PABPN1-202ENST00000397276 RNF39Q9H2S5 420 aa24.72■■□□□ 1.55
PABPN1-202ENST00000397276 PCDH18Q9HCL0 1135 aa24.72■■□□□ 1.55
PABPN1-202ENST00000397276 NKX1-2Q9UD57 310 aaPredicted RBP24.72■■□□□ 1.55
PABPN1-202ENST00000397276 PRKAG3Q9UGI9 489 aa24.72■■□□□ 1.55
PABPN1-202ENST00000397276 PIN4Q9Y237 131 aaKnown RBP24.72■■□□□ 1.55
PABPN1-202ENST00000397276 YWHAGP61981 247 aaKnown RBP eCLIP24.71■■□□□ 1.55
PABPN1-202ENST00000397276 GRB14Q14449 540 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 MTFR1Q15390 333 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 FAM47CQ5HY64 1035 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 ANKRD20A2Q5SQ80 823 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 ANKRD20A1Q5TYW2 823 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 ANKRD20A3Q5VUR7 823 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 NOTUMQ6P988 496 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 ZNF467Q7Z7K2 595 aaPredicted RBP24.71■■□□□ 1.55
PABPN1-202ENST00000397276 TMEM40Q8WWA1 233 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 SLC4A5Q9BY07 1137 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 PRPF4O43172 522 aaKnown RBP eCLIP24.71■■□□□ 1.553e-10■■■□□ 18.8
PABPN1-202ENST00000397276 ABL2P42684 1182 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 HDAC4P56524 1084 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 BOLA3Q53S33 107 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 C9orf57Q5W0N0 161 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 LVRNQ6Q4G3 990 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 PLEKHH3Q7Z736 793 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 ECHDC2Q86YB7 292 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 TTC39CQ8N584 583 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 USP29Q9HBJ7 922 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 RXFP1Q9HBX9 757 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 KLHL14Q9P2G3 628 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 CEP350Q5VT06 3117 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 KBTBD13C9JR72 458 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 APOL1O14791 398 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 STILQ15468 1287 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 HHATQ5VTY9 493 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 TMEM110Q86TL2 294 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 PTPN18Q99952 460 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 ACSS3Q9H6R3 686 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 PLEKHA5Q9HAU0 1116 aa24.71■■□□□ 1.55
PABPN1-202ENST00000397276 GLTPD2A6NH11 291 aa24.7■■□□□ 1.54
PABPN1-202ENST00000397276 E7ESA3 106 aa24.7■■□□□ 1.54
PABPN1-202ENST00000397276 FGFR1P11362 822 aa24.7■■□□□ 1.54
PABPN1-202ENST00000397276 ZBTB6Q15916 424 aa24.7■■□□□ 1.54
PABPN1-202ENST00000397276 ETNK1Q9HBU6 452 aa24.7■■□□□ 1.54
PABPN1-202ENST00000397276 MORF4L1Q9UBU8 362 aa24.7■■□□□ 1.54
PABPN1-202ENST00000397276 PHTF1Q9UMS5 762 aa24.7■■□□□ 1.54
PABPN1-202ENST00000397276 SMG5Q9UPR3 1016 aaKnown RBP24.7■■□□□ 1.54
PABPN1-202ENST00000397276 PLXNB2O15031 1838 aa24.7■■□□□ 1.54
PABPN1-202ENST00000397276 EME2A4GXA9 379 aaPredicted RBP24.7■■□□□ 1.54
PABPN1-202ENST00000397276 SPTLC1O15269 473 aa24.7■■□□□ 1.54
PABPN1-202ENST00000397276 TYROBPO43914 113 aa24.7■■□□□ 1.54
PABPN1-202ENST00000397276 CCDC110Q8TBZ0 833 aa24.7■■□□□ 1.54
PABPN1-202ENST00000397276 NDRG1Q92597 394 aaKnown RBP24.7■■□□□ 1.54
PABPN1-202ENST00000397276 DHX35Q9H5Z1 703 aaKnown RBP24.7■■□□□ 1.54
PABPN1-202ENST00000397276 ALG13Q9NP73 1137 aaKnown RBP24.7■■□□□ 1.54
PABPN1-202ENST00000397276 NR2E3Q9Y5X4 410 aa24.7■■□□□ 1.54
PABPN1-202ENST00000397276 ZBED1O96006 694 aa24.69■■□□□ 1.54
PABPN1-202ENST00000397276 IQSEC1Q6DN90 963 aa24.69■■□□□ 1.54
PABPN1-202ENST00000397276 CFAP36Q96G28 342 aa24.69■■□□□ 1.54
PABPN1-202ENST00000397276 TMEM237Q96Q45 408 aa24.69■■□□□ 1.54
PABPN1-202ENST00000397276 SENP1Q9P0U3 644 aa24.69■■□□□ 1.54
PABPN1-202ENST00000397276 ADGRD1Q6QNK2 874 aa24.69■■□□□ 1.54
PABPN1-202ENST00000397276 LRRC8CQ8TDW0 803 aa24.69■■□□□ 1.54
PABPN1-202ENST00000397276 CPA4Q9UI42 421 aa24.69■■□□□ 1.54
PABPN1-202ENST00000397276 RRN3P2A6NIE6 340 aa24.68■■□□□ 1.54
PABPN1-202ENST00000397276 APRTP07741 180 aa24.68■■□□□ 1.54
PABPN1-202ENST00000397276 ATP2A2P16615 1042 aaKnown RBP24.68■■□□□ 1.54
PABPN1-202ENST00000397276 PDK2Q15119 407 aa24.68■■□□□ 1.54
PABPN1-202ENST00000397276 SEPT7Q16181 437 aaKnown RBP24.68■■□□□ 1.54
PABPN1-202ENST00000397276 KLHL38Q2WGJ6 581 aa24.68■■□□□ 1.54
PABPN1-202ENST00000397276 KBTBD12Q3ZCT8 623 aa24.68■■□□□ 1.54
PABPN1-202ENST00000397276 AGGF1Q8N302 714 aaeCLIP24.68■■□□□ 1.54
PABPN1-202ENST00000397276 TCRBV9S1A1TA0A576 114 aa24.68■■□□□ 1.54
PABPN1-202ENST00000397276 F5H423 210 aaPredicted RBP24.68■■□□□ 1.54
PABPN1-202ENST00000397276 PPP1R12AO14974 1030 aaPredicted RBP24.68■■□□□ 1.54
PABPN1-202ENST00000397276 SMNDC1O75940 238 aaKnown RBP eCLIP24.68■■□□□ 1.548e-8■□□□□ 11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms